| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0091 |
|---|
| Symbol | sdhB |
|---|
| ID | 5082678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 97686 |
|---|
| End bp | 98462 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640481645 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_001166307 |
|---|
| Protein GI | 146276148 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0555148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCAGC TCACGCTCCC CAAGAACTCC AAGGTCCGCA CCGGCAAGAC CTGGCCGAAG
CCCGAGGGCA GGAACGTCCG CAAGTTCATG ATCTATCGCT GGGATCCGGA CACGGGCGAG
AACCCGCGGG TGGACACCTA CTTCCTCGAC ATGGACAAGT GCGGCCCGAT GGTTCTGGAC
GCGCTGATCA AGATCAAGAA CGAGGTCGAT CCCACGCTGA CCTTCCGCCG CTCCTGCCGT
GAGGGGATCT GCGGCTCTTG CGCGATGAAC ATCGACGGGA TCAACACGCT GGCCTGCATC
TACGGTCTCG ACGAGATCAA GGGCGACGTG AAGATCTACC CGCTGCCGCA CATGCCGGTG
ATCAAGGACC TGATCCCCGA CCTGTCGCTG TTCTACGCGC AGCACGCCTC GATCATGCCG
TGGCTCGAGA CCAAGACGGT CGAGCCCGCG AAGGAGTGGC GCCAGTCGGT CGAGGACCGG
GCCAAGCTCG ACGGGCTTTA CGAATGCGTC ATGTGCGCCT GCTGCTCGAC CTCGTGCCCG
AGCTACTGGT GGAACGGCGA CCGCTATCTC GGGCCGGCGG CGCTGTTGCA CGCCTATCGC
TGGATCGTGG ACAGCCGCGA CGAGGCCACG CCCGAACGGC TCGACATGCT CGAGGATCCG
TTCAAGCTCT ACCGCTGCCA CACGATCATG AACTGCGCGA AGACCTGCCC CAAGGGCCTC
AACCCGGCCA AGGCCATCGC CGAGATCAAG AAGATGATGG TCGAGCGCGT CATCTGA
|
|---|
| Protein sequence | MVQLTLPKNS KVRTGKTWPK PEGRNVRKFM IYRWDPDTGE NPRVDTYFLD MDKCGPMVLD
ALIKIKNEVD PTLTFRRSCR EGICGSCAMN IDGINTLACI YGLDEIKGDV KIYPLPHMPV
IKDLIPDLSL FYAQHASIMP WLETKTVEPA KEWRQSVEDR AKLDGLYECV MCACCSTSCP
SYWWNGDRYL GPAALLHAYR WIVDSRDEAT PERLDMLEDP FKLYRCHTIM NCAKTCPKGL
NPAKAIAEIK KMMVERVI
|
|---|
| |