| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0088 |
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| Symbol | sdhA |
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| ID | 5082675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 95269 |
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| End bp | 97071 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481642 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001166304 |
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| Protein GI | 146276145 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.61888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTT ACACGTACGA GACGCATGAC TACGACGTCG TGGTGGTGGG CGCCGGCGGT
GCCGGCCTCC GCGCGACGCT GGGGATGGCC GAGCAGGGCC TGCGCACCGC CTGCGTCACC
AAGGTTTTCC CGACCCGCAG CCATACGGTT GCGGCGCAGG GCGGCATCGC CGCCTCGCTC
GCCAACATGG GGCCGGACAA CTGGCAGTGG CACATGTACG ACACCGTGAA AGGGTCGGAC
TGGCTGGGCG ACACCGACGC GATGGAATAT CTCGCGCGTG AGGCCCCGAA GGCGGTCTAT
GAGCTCGAGC ACTACGGCGT GCCCTTCTCG CGCACCGAGG AAGGCAAGAT CTACCAGCGC
CCGTTCGGCG GCCACACGAC CCAGTTCGGC GAAGGCCCGC CGGTGCAGCG CACCTGCGCC
GCGGCGGACC GGACCGGCCA CGCGATCCTG CACACGCTCT ATGGCCAGTC GGTCAAGAAC
AACGCCGAGT TCTTCATCGA ATATTTCGCG CTGGATCTCA TCATCCAGGA CGGCCGCTGC
ACCGGCGTCG TCGCCTGGCG GCTGGAAGAC GGCACGATCC ACGTCTTCAA CGCCAAGCTC
ACGGTTCTGG CGACCGGCGG CTACGGCCGC GCCTATTTCT CGGCCACCTC GGCCCATACC
TGCACCGGCG ACGGCGGCGG GATGGTGGCG CGGGCCGGCC TGCCGCTGCA GGACATGGAA
TTCGTGCAGT TCCACCCGAC CGGCATCTAC GGCTCGGGCT GCCTGATCAC CGAGGGCGCG
CGCGGCGAGG GTGGCTATCT CACGAACGCG AACGGCGAAC GGTTCATGGA GCGCTACGCT
CCGACCTACA AGGATCTGGC CAGCCGTGAC GTGGTCAGCC GCTGCATGAC GCTGGAGATC
CGCGAGGGCC GCGGCGTGGG CGAGCATGGC GACCACATCC ACCTGCACCT GAACCACCTG
CCGCCCGAGA CGCTGGCGCT GCGCCTGCCC GGCATCTCGG AATCGGCGAA GATCTTTGCC
GGCGTGGACG TTCACAAGGA ACCAATCCCG GTCCTGCCGA CTGTGCACTA CAACATGGGC
GGCATTCCGA CCAACTACTG GGGCGAGGTT CTCGCCCCCA CCGCGGACGA TCCCGACCGC
GTCTTCCCGG GCCTGATGGC GGTGGGCGAG GCCGGCTGCG CCTCGGTGCA TGGCGCGAAC
CGGCTGGGCT CGAACTCGCT GATCGACCTC GTGGTGTTCG GCCGCGCCGC GGCGATCCGC
GCCGGCCAGA TCGTGAAACC GCACGAGTTC CACGCCGATG TGCCCAAGGC CCAGGTGGAC
GAGATCCTCG GCCGGTTCGA CGACCTGCGC CACGCCAACG GCGCCATCCC GACCGCCGAC
CTGCGGCTCG AGATGCAGCG CACCATGCAG GCCGACGCCG CCGTGTTCCG CACCGACAAG
ACGCTGGCCG AAGGCGTCGA GAAGATGAAG GGGATCGCGG CCAAGCTCTC GGATCTCAAG
GTCACCGACC GCAGCCTCAT CTGGAACTCG GACCTGATGG AGACGCTGGA ACTGACCAAC
CTGATGCCGA ACGCGCTGGC CACGATCGTG GCGGCCGAGG CGCGCAAGGA AAGCCGCGGC
GCCCACGCCC ACGAGGACTG GCCGAACCGC GACGACGAGA ACTGGCGCGT GCACAGCCTC
GCCACGGTGA AGGGCAACGA GGTCACGCTC GCCTCCCGGC CGGTCCATCT CGACCCGCTG
ACCAAACAGT CCGAAGGCGG GATCGACCTG AAGAAGATCG CGCCCAAGGC GCGGGTCTAT
TGA
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| Protein sequence | MAAYTYETHD YDVVVVGAGG AGLRATLGMA EQGLRTACVT KVFPTRSHTV AAQGGIAASL
ANMGPDNWQW HMYDTVKGSD WLGDTDAMEY LAREAPKAVY ELEHYGVPFS RTEEGKIYQR
PFGGHTTQFG EGPPVQRTCA AADRTGHAIL HTLYGQSVKN NAEFFIEYFA LDLIIQDGRC
TGVVAWRLED GTIHVFNAKL TVLATGGYGR AYFSATSAHT CTGDGGGMVA RAGLPLQDME
FVQFHPTGIY GSGCLITEGA RGEGGYLTNA NGERFMERYA PTYKDLASRD VVSRCMTLEI
REGRGVGEHG DHIHLHLNHL PPETLALRLP GISESAKIFA GVDVHKEPIP VLPTVHYNMG
GIPTNYWGEV LAPTADDPDR VFPGLMAVGE AGCASVHGAN RLGSNSLIDL VVFGRAAAIR
AGQIVKPHEF HADVPKAQVD EILGRFDDLR HANGAIPTAD LRLEMQRTMQ ADAAVFRTDK
TLAEGVEKMK GIAAKLSDLK VTDRSLIWNS DLMETLELTN LMPNALATIV AAEARKESRG
AHAHEDWPNR DDENWRVHSL ATVKGNEVTL ASRPVHLDPL TKQSEGGIDL KKIAPKARVY
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