| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0046 |
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| Symbol | dapD |
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| ID | 5082455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 54204 |
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| End bp | 55028 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481601 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001166263 |
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| Protein GI | 146276104 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTATT CCGCGCTCGA AGCCGCCATC GAAGCCGCCT GGGAGGCGCG CGACACGATC
ACCCCGGCCA CCAAGGGCGA GGCGCGCGAC GCCGTCGAGG CGACGCTCGA GGCGCTCGAC
AAGGGCAGTC TGCGGGTCGC CGAAAAGCGC GGCGCCGACT GGCATGTGAA TCAGTGGGCG
AAGAAGGCGG TGCTGCTCGG CTTCCGGCTG AAGGACATGG ACGTGCAGAC GGGCGGCCCG
CAGGGCGGCA CCTGGTGGGA CAAGGTGGAC AGCAAGTTCG CCCAGTGGGG CGAGGCGCAG
TGGAAGGCCG CGGGCTTCCG CGCGGTGCCG AACTGTATCG TCCGCCGCTC GGCCTATATC
GCCAAGGGCG TGGTGCTGAT GCCCTCGTTC GTGAACCTTG GCGCCTATGT CGATGAAGGC
ACGATGGTGG ACACCTGGGC CACCGTCGGC TCCTGCGCGC AGATCGGTAA GAACGTGCAT
CTCTCGGGCG GCGTGGGCAT CGGCGGCGTG CTGGAACCGA TGCAGGCGGG GCCGACGATC
ATCGAGGACA ACTGCTTCAT CGGCGCCCGC TCGGAGGTGG TCGAGGGCTG CATCGTCCGC
GAAGGCTCGG TGCTGGGCAT GGGGGTCTTC ATCGGCAAGT CGACGAAGAT CGTGGACCGC
GAGACCGGCG AGGTCATGTA TGGCGAGGTC CCGGCCGGTT CGGTCGTCGT CGCGGGCTCG
ATGCCGTCGA AGGGCGGGGT GAACCTCTAT TGCGCGGTGA TCGTGAAGCG CGTCGATGCG
CAGACGCGGT CGAAGACCTC GATCAACGAG CTGTTGCGCG ACTGA
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| Protein sequence | MSYSALEAAI EAAWEARDTI TPATKGEARD AVEATLEALD KGSLRVAEKR GADWHVNQWA
KKAVLLGFRL KDMDVQTGGP QGGTWWDKVD SKFAQWGEAQ WKAAGFRAVP NCIVRRSAYI
AKGVVLMPSF VNLGAYVDEG TMVDTWATVG SCAQIGKNVH LSGGVGIGGV LEPMQAGPTI
IEDNCFIGAR SEVVEGCIVR EGSVLGMGVF IGKSTKIVDR ETGEVMYGEV PAGSVVVAGS
MPSKGGVNLY CAVIVKRVDA QTRSKTSINE LLRD
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