| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0014 |
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| Symbol | |
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| ID | 5082275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 16743 |
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| End bp | 22169 |
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| Gene Length | 5427 bp |
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| Protein Length | 1808 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640481569 |
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| Product | alpha-2-macroglobulin domain-containing protein |
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| Protein accession | YP_001166231 |
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| Protein GI | 146276072 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.617049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.166379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCC GTCACTTGCT GCCGGCCCTG ATGCTTGGAC TTCTGCTGCC GCTCTCGGCC
ATGGCCCAGG ACTGGCTGCC GGACCGCCGC TTCGTCCTCA GCGCCGACAC GGACCTGCCG
GGCAGCGACA TGGCGACCCT CCTCGACACC ACGCTCGAGG CCTGCGAGCG CGCCTGCCTG
TCGCGCTCGG GCTGCGTGGC CTTCACCTAC AACGCGCGCA ACGGCTCGTG CTTTCCCAAG
TCCGCCTCGG GCGACGAGGC ACCCTATCAA GGCGCCACCT CGGGCGTCGT GGTCCCGGCG
GACCCGGCCC GGCAGGAGAC GGCGCGCCTT CGCGCGTCCG AGCTGGCCTT CCTGCCGGAC
TACGACCTGA CGCGCGCGAA GGAGCAGGCC GCGAGCCTCG GAAACGAACA TGCGGTGAAC
GGCTTCACCG CCGACGAGCA TCTTCGCAGC GCCTCTCGCG CCGAGGCGCA GGGTGATCTC
TTGGCGGCAG CGAACTTCAC GGGCGCCGCG GTCAACGCCT CGGACCGGGG CGAGACATGG
ATCGACTACG CCCGCCGACT GCGCGCGGCG GGCGAGCCCG ACACGAGGGG CCGCGACATG
CTGCGCGACC GCGCCTTCCG CGCCGCCATC AACGGCTATC TCCGCGCCGC CACCCCGGCG
CTGCGCCATA CGGCGCTGGT CGAACTGGGG CTCGCGGCCG AAGCGGTGGA TCGCGGGCGC
GACATGGTGC AGGCGCTGCG GCTGGCCCAG TCGATCCAGC CGCGGGACGA TACGGCGCGG
CTGCTGGCCT CGGCGGCGGG CAAGTACGGG TTCCGCATCA TCGAGGACAC GGTCGAGGCG
GACACGGCGC GTCCGCGGAT CTGCGTCACC TTCTCTGAAA ATCTGGTCGA GAGCGGCGTG
GACTATGCCA GCTTCGTCCA GCTCACCGAG CCGGGTCTGA CGGTCGAGGC CGAGGACCGC
CGGATCTGCG TGGGCGGCGT GAGCCACGGC GCGCGCCATG TGCTGACCTT CCGCGAGGGG
CTGCCCGCGG CCGACGGCCA GACGCTCGCC CGATCGGTGC AGATCGCGGC CTATGTGCGC
GACCGCGCGC CCTCCGTCCG GTTCCCGAGC CGCGCCTATG TGCTGCCACG AACCGGCGCT
CCGGCAATCC CGGTCGAGAC GGTGAATACC CAGACACTCG ATCTGGCCGT CTATCGCGTG
TCGGACCGCA ACCTGTTGCG GGCTATCCAG CAGGACTATC TCGGCCGGCC GCTCGATCAG
TGGCAGGCGG ACCAGTTCAC CTCGGAGGTG GGCGAAGAGA TCTGGACGGG CACGGGCGAG
GTGGCCATGG AGGTCAACCG CGACATGACC ACCCGCCTGC CGATGGACGC GCCGCTGCGG
GGCCTGCCCG CGGGCATCTA CGCGCTGAAG GCCGCGATCC CGGGGCAGGA CCGCTACGAG
CATCCGCCCG CCTGGCAATG GTTCGTGGTC TCGGACCTGG GTGTGACCAC GCTCTCGGGG
ACCGACGGGC TGCATGTCTT CGTGCGCAGC CTCGGGACGG CCGAGCCCAA GGCGGGCGTC
GAGGTCGAGC TTCTGTCGCG CGCGAACGCC GTTCTCGGCA CGGCCACGAC CGACGCCGAG
GGCCTTGCCG CCTTCGATCC GGGCCTGACC CGCGGCACCG GCGCGGCCGA GCCCGCGCTC
GTCGTGGTGA AGGAGGGCGA GGCGGATGTG GCCTTCCTCT CGCTGACCGA CCCGGAGTTC
GATCTCTCCG ACCGCGGCGT CGAGGGGCAC GAGCCTGCCC CTCCGGTGGA TGTGTTCCTT
GCGACTGACC GCGGCGCCTA CCGGGCGGGC GAGACGGTCC ACGCACTCGC GCTGGCGCGC
GATGCCGCCG CCGCCGCCAT CGAGGGCCTG CCGCTGACCG CGATCCTCAA GCGCCCGGAC
GGGGTGGAAT ATTCCCGCGC GCTGGCCGCG GGCACCGGCG CGGGCGGCCA TGTGTTCGAC
CTGCCGCTTG CGGGCACCGC GCCGCGCGGC GTGTGGCGGC TGGAGGTGCT GGCCGATCTC
GAAGCGACCC CGCTGGCCGC AAAGACCCTG CTGGTCGAGG ATTTCCTCCC CGAGCGGATC
GACGTTGCGG CCAGCCTGCC CGAGGCGCCC ATTAAGCTCG GCGATGCGCC CGAACTGACG
GTCGAGGCGA ACTTCCTCTA TGGCGCGCCG GGGGCGGACC TCGCCATCGA GGGCGAGGTG
CTGCTGCGCA CGGCCGAGGG GCTGCCCGGC TACTCCGGCT ATGTCTTCGG CCGGTCCGAC
CGCCGGTTCG ATCCGCAGAT CGCCTCGTTC GGCGGCGAGC GCACGGACGA GACAGGAGCG
GCCCGCTTTG CGATCCGCCT GCCGCAGGTG GAGGATCCGG CGCGTCCGCT CGAGATCCTT
GTGGCGGCGC GGGTTTCGGA AGGGTCAGGC CGCCCGGTCG AGCGGACGAT CACCCGCCGG
CTGCGTCCGG CCGAGCCGAT GATCGGCCTG CGCCCGCTCT TTGACGGGGT GGCCGCGCAG
GGGTCCGAGG CGCGTTTCGC GCTGGTGGGC GTGGGCCCCG AGGAGACGCC CGTGCCGATG
CAGGTGCGCT GGACGCTGAA CCGGGTCGAG ACCGACTATC AATGGTATCA GCAATGGGGC
AACTGGGCGT GGGAGCCGGT CGAGACCCGC ACCCGCGTGG CCGAGGGCGA GGCGCAGCTG
GGCACCTCTC CGGTCGAGAT CGGGGCTCCG GTGGACTGGG GTCAGTATGA GCTTGTGGTC
GAGCGCGCCG ACGGCCGGCC GGCCGCGAGC TCCACCAGCT TCCATGCCGG CTGGTATGCC
CCCGCCGATG TCACCGCGAC ACCCGACACG CTGGAGCTGT CGCTCGACAA GCCCGCCTAC
CGGCCCGGCG AGACGGCGCA GCTTCGGATC GTGCCGCGCG CGCCGGGCAA GGCGCTGGTG
ACGGTGCTCT CGAACCGGGT GATCGCGATG AAGGCGGTCG AGGTCGGCGA GGGCGAGACG
CTGGTCGATC TGCCGGTGAC GGACGAGTGG GGGACGGGGG TTTATGTGAC GGCCACGCTC
CTGCGGCCGA TGGACGTGGC GGCGGGGCGC AACCCGACCC GCGCCCTGGG GCTGGCCCAT
GCGGCCATCG ACCCCGGCGA GAAGAGGCTT GGGGCCACGA TCGAGACCGC CGCCGAGGCC
GCGCCGCGTG GCCCGATGGA GATCGCGGTC AAGGTCGAGG GGACAGCGCC GGGCGAGACG
GTCCACGCCA CGATTGCCGC CGTCGATGTG GGGATCCTGA ACCTCACCGG CTTCGAGACG
CCCGACCCCG AGGACCATTA CTTCGGCCAG CGCAAGCTCG GCGTCGGCAT CCGTGACCTC
TATGGGCGGC TGATCGACGG GATGAACGGC GCGCAGGGCT CGGTCCGCTC CGGCGGGGAT
GGCGGGCGTG CGCAGATGCA GGCGCCGCCT CCGACGGAAG AGCTGGTGGC CTTCTTCTCG
GGCCCGGTCG AGGTGGGGCC GGACGGCCTC GCCCGCGCGC GCTTCGATCT GCCGGCCTTC
AACGGCACGG TGCGGGTGAT GGCGGTCGTC TGGTCGAAGA CCGGCGTCGG CCATGCCGAG
CAGGATGTGC TCGTGCGCGA TCCGGTGGTG GTGACGGCGA GCCTGCCGCG CTTCCTCGCG
CCGGGCGACG AAAGCCGCCT TCTCCTCGAG ATCGCCCATG CGACCGGTTC CGCCGGACGG
GTGAGCCTCG ATGTCTCCTC GCCGGGCCTC ACGGTCGGAT CGGTGCCCTC GGGCCTCGAT
CTGGCCGAAA AAGGCCGCGC GCGCGTTGAA GTTCCGGTTT CGGCCGGTCG GACGGGCCTG
CAGGAGATCG AGGTCGCGCT CACCACGCCG GAGGGCAAGC AGCTGACGAG GCGCCTTGTG
GTGCCGGTGC AGGTGAACGA CCCCGAGATC ACGCGGCGCG ACCGGCTGAC GCTCGATGCG
GGCCAGACAT TCACGCTGGA CGACAACCTG TTTGCCGGCT TCGCGCCGGG CACGGGGCGC
GCGACCATGG CCATCGGCCC GATCGCGCGG CTCGATACGG CGGGGCTGCT GGCCAGCCTC
GACCGCTATC CCTACGGCTG CACCGAGCAG ATCACCTCGC GGGCGCTGCC GCTCCTCTAC
CTGAGCGGCG TGGCCCGGGC GCTCGATCTG CCCGGCACCG AGGACATGTC GGCGCGCATC
GGGCAGGCCA TCGACGAGGT GCTGACCAAC CAGACGGCCG AAGGAGCCTT CGGCCTCTGG
CGGGCGCAGT CGGGCGACTT CTGGCTCGAC GCCTATGTCA CCGACTTCCT CTCCCGCGCG
AAGGCGCAGG GATACAAGGT GCCGGATCTG GCCATGCGCC GGGCGCTCGA CAACCTCCGC
AATCAGGTGA ACTACGCCGC CGACTTCGAC TCGGGCGGCG AGGGGCTGGC CTATGCGCTG
ATGGTGCTGG CCCGCGAAGG AGCGGCCGCC ATCGGCGACT TGCGCTACTA TGCCGATGTG
AAGGGCGACG CCATTGCCAC GCCCGCGGCG CAGGCCCAGC TTGGCGCGGC GCTCGCCAGC
TACGGCGATC AGGTCAGGGC GGATGCGATG TTCCGCAAGG CCGCCGCCCG GCTCAACGCC
GCGCTTGCCG CGCCATCCGA GCAGCTGTTC CGTGCCGACT ACGGCACCCC GTACCGCGAC
ACGGCCACGG TGCTCACGCT GGCGGCCGAG GCCGGCTCGC AGGCGGTGGA CCGCGAGGCG
GTGACGACCG CGCTCGCCAC GCGGACCGGC ACGCTCTCCA CGCAGGAGGC GACCTGGACG
CTTCTGGCCA CGAACGCCCT GATCGACCGG CCGGAGGTGG AGGGCATCGC CCTCGACGGC
GCGCCCGCGA CAGGCCCGCT CGTGCGGCTC TTGCGCGACG GGGATCCGGC GGTGGCGGTC
ACCAACTCGG GTGGCCCGCA GGTGCTGACC ATCACGACCA CCGGGGTTCC CTCGGAGCCC
GCGCCCGCCG GCGGCAACGG CTATGCCATC GCGCGAAGCT ACTACACGAT GGAGGGCGAT
GCCGCCGATC CGGCCTCGGT CGCGGCGGGC ACGCGGCTGG TGGCGGTGCT GGAAGTGACA
CCCTTCGGCA ACGGCGAGGG CCGGCTCATG GTCAACGACC CGCTGCCCGC GGGATTCGAG
ATCGACAATC CGAACCTGAT GCGGGGCGGA CAGGTCGATG CGCTGGACTG GCTCGCGCCG
GTCGAGGATG TGGCCCATGC CGAGTTCCGG CAGGACCGTT TCCTCGCCGC GCTCGACCGG
CTCAACGGCG AGGCCTTCCG GCTGGCCTAT GTCGTGCGCG CCGTCTCGCC GGGCACGTTC
CACCACCCCG CGGCCTCGGT CGAGGACATG TACCGGCCCG AGTTCCGCGC CTGGACCGAG
GCGGGCCGCG TCTCCGTCAC CCCATGA
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| Protein sequence | MRTRHLLPAL MLGLLLPLSA MAQDWLPDRR FVLSADTDLP GSDMATLLDT TLEACERACL
SRSGCVAFTY NARNGSCFPK SASGDEAPYQ GATSGVVVPA DPARQETARL RASELAFLPD
YDLTRAKEQA ASLGNEHAVN GFTADEHLRS ASRAEAQGDL LAAANFTGAA VNASDRGETW
IDYARRLRAA GEPDTRGRDM LRDRAFRAAI NGYLRAATPA LRHTALVELG LAAEAVDRGR
DMVQALRLAQ SIQPRDDTAR LLASAAGKYG FRIIEDTVEA DTARPRICVT FSENLVESGV
DYASFVQLTE PGLTVEAEDR RICVGGVSHG ARHVLTFREG LPAADGQTLA RSVQIAAYVR
DRAPSVRFPS RAYVLPRTGA PAIPVETVNT QTLDLAVYRV SDRNLLRAIQ QDYLGRPLDQ
WQADQFTSEV GEEIWTGTGE VAMEVNRDMT TRLPMDAPLR GLPAGIYALK AAIPGQDRYE
HPPAWQWFVV SDLGVTTLSG TDGLHVFVRS LGTAEPKAGV EVELLSRANA VLGTATTDAE
GLAAFDPGLT RGTGAAEPAL VVVKEGEADV AFLSLTDPEF DLSDRGVEGH EPAPPVDVFL
ATDRGAYRAG ETVHALALAR DAAAAAIEGL PLTAILKRPD GVEYSRALAA GTGAGGHVFD
LPLAGTAPRG VWRLEVLADL EATPLAAKTL LVEDFLPERI DVAASLPEAP IKLGDAPELT
VEANFLYGAP GADLAIEGEV LLRTAEGLPG YSGYVFGRSD RRFDPQIASF GGERTDETGA
ARFAIRLPQV EDPARPLEIL VAARVSEGSG RPVERTITRR LRPAEPMIGL RPLFDGVAAQ
GSEARFALVG VGPEETPVPM QVRWTLNRVE TDYQWYQQWG NWAWEPVETR TRVAEGEAQL
GTSPVEIGAP VDWGQYELVV ERADGRPAAS STSFHAGWYA PADVTATPDT LELSLDKPAY
RPGETAQLRI VPRAPGKALV TVLSNRVIAM KAVEVGEGET LVDLPVTDEW GTGVYVTATL
LRPMDVAAGR NPTRALGLAH AAIDPGEKRL GATIETAAEA APRGPMEIAV KVEGTAPGET
VHATIAAVDV GILNLTGFET PDPEDHYFGQ RKLGVGIRDL YGRLIDGMNG AQGSVRSGGD
GGRAQMQAPP PTEELVAFFS GPVEVGPDGL ARARFDLPAF NGTVRVMAVV WSKTGVGHAE
QDVLVRDPVV VTASLPRFLA PGDESRLLLE IAHATGSAGR VSLDVSSPGL TVGSVPSGLD
LAEKGRARVE VPVSAGRTGL QEIEVALTTP EGKQLTRRLV VPVQVNDPEI TRRDRLTLDA
GQTFTLDDNL FAGFAPGTGR ATMAIGPIAR LDTAGLLASL DRYPYGCTEQ ITSRALPLLY
LSGVARALDL PGTEDMSARI GQAIDEVLTN QTAEGAFGLW RAQSGDFWLD AYVTDFLSRA
KAQGYKVPDL AMRRALDNLR NQVNYAADFD SGGEGLAYAL MVLAREGAAA IGDLRYYADV
KGDAIATPAA QAQLGAALAS YGDQVRADAM FRKAAARLNA ALAAPSEQLF RADYGTPYRD
TATVLTLAAE AGSQAVDREA VTTALATRTG TLSTQEATWT LLATNALIDR PEVEGIALDG
APATGPLVRL LRDGDPAVAV TNSGGPQVLT ITTTGVPSEP APAGGNGYAI ARSYYTMEGD
AADPASVAAG TRLVAVLEVT PFGNGEGRLM VNDPLPAGFE IDNPNLMRGG QVDALDWLAP
VEDVAHAEFR QDRFLAALDR LNGEAFRLAY VVRAVSPGTF HHPAASVEDM YRPEFRAWTE
AGRVSVTP
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