Gene Rsph17025_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0012 
Symbol 
ID5082273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp13543 
End bp14712 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content72% 
IMG OID640481567 
Productbeta-ketothiolase 
Protein accessionYP_001166229 
Protein GI146276070 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0216237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA TCCTCATCCT CTCCGCCGTG CGGACCGCCA TCGGCGGCTT CGGCGGCGCG 
CTCGCCGCCG TGCCACCGGG CGATCTCGCC ACCACCGTCA CCCGCGCCGC GCTGGAGCGC
GCGGGGGTCG AGCCGGACCG CGTCGGTCAT GTGGTCTTCG GCCATGTGAT CAACACCGAG
CCGCGCGACA TGTATCTCTC GCGCGTGGCG GCGATGCAGG CGGGCATCCC CTCGGGCGTG
CCGGCAATGA ACGTGAACCG GCTCTGCGGC TCGGGCGTGC AGGCCATTGT CTCGGCCATG
CAGGCGCTGA TGCTGGGCGA TGCCGAGGTG GCGCTGGCGG GCGGGGCGGA ATCGATGAGC
CGCGCGCCCT ACGTGCTGGC CTCGGCCCGC TGGGGACAGA AGATGGGCGA CACGCGCGCG
CTCGACATGA TGACGGGGGC GCTGAACTGC CCCTTCGGCA CCGGCCACAT GGGCATCACC
GCCGAGATCG TGGCCGAGCG GCACGGCATC AGCCGCGAGG ATCAGGACGC CTTCGCGCTG
GAAAGCCAGA CCCGTGCCGC GCGCGCGCAG GAGGAGGGGC GGTTTGACGG CCAGATCGCC
CCGGTGGAGA TCGCCTCCCG CAAGGGGCCG GTTTCCTTCG CGCGGGACGA ACATCCCAAG
GCCACCACGG CCGAGGCGCT GGCGGGTCTG CGCCCCGCCT TCCAGAAGGG CGGCACCGTG
ACGGCCGGCA ATGCGAGCGG CATCAACGAT GGGGCCGGCG CGCTGGTGCT GGCGCGCGAG
GGGGCGGTGC CCGGCGCGCG TCCGCTCGGC CGGCTCATCG GCTATGCCCA TGCGGGTGTC
GATCCCGAGG TGATGGGGCT GGGACCGATC CCGGCGGTGC AGGCGCTCTG CGCACGCACG
GGCCTCTCGG TCGCGGACTT CGACGTGATC GAGTCGAACG AGGCCTTTGC CGCGCAGGCG
CTGGCGGTGA GCCGCGCGCT CGACTTCGAT CCGGCGAAGG TCAATCCGAA CGGTGGCGCC
ATCGCGCTCG GCCATCCGGT CGGCGCCACG GGGGCGATCA TCACGGTGAA GGCGCTGCAC
GAGCTGCACC GCACCGGCGG GCGTCGCGCG CTTGTCACCA TGTGCATCGG CGGCGGGCAG
GGGATCGCGC TGGCGCTGGA ACGGGTCTGA
 
Protein sequence
MSDILILSAV RTAIGGFGGA LAAVPPGDLA TTVTRAALER AGVEPDRVGH VVFGHVINTE 
PRDMYLSRVA AMQAGIPSGV PAMNVNRLCG SGVQAIVSAM QALMLGDAEV ALAGGAESMS
RAPYVLASAR WGQKMGDTRA LDMMTGALNC PFGTGHMGIT AEIVAERHGI SREDQDAFAL
ESQTRAARAQ EEGRFDGQIA PVEIASRKGP VSFARDEHPK ATTAEALAGL RPAFQKGGTV
TAGNASGIND GAGALVLARE GAVPGARPLG RLIGYAHAGV DPEVMGLGPI PAVQALCART
GLSVADFDVI ESNEAFAAQA LAVSRALDFD PAKVNPNGGA IALGHPVGAT GAIITVKALH
ELHRTGGRRA LVTMCIGGGQ GIALALERV