Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0012 |
Symbol | |
ID | 5082273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 13543 |
End bp | 14712 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640481567 |
Product | beta-ketothiolase |
Protein accession | YP_001166229 |
Protein GI | 146276070 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0216237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGACA TCCTCATCCT CTCCGCCGTG CGGACCGCCA TCGGCGGCTT CGGCGGCGCG CTCGCCGCCG TGCCACCGGG CGATCTCGCC ACCACCGTCA CCCGCGCCGC GCTGGAGCGC GCGGGGGTCG AGCCGGACCG CGTCGGTCAT GTGGTCTTCG GCCATGTGAT CAACACCGAG CCGCGCGACA TGTATCTCTC GCGCGTGGCG GCGATGCAGG CGGGCATCCC CTCGGGCGTG CCGGCAATGA ACGTGAACCG GCTCTGCGGC TCGGGCGTGC AGGCCATTGT CTCGGCCATG CAGGCGCTGA TGCTGGGCGA TGCCGAGGTG GCGCTGGCGG GCGGGGCGGA ATCGATGAGC CGCGCGCCCT ACGTGCTGGC CTCGGCCCGC TGGGGACAGA AGATGGGCGA CACGCGCGCG CTCGACATGA TGACGGGGGC GCTGAACTGC CCCTTCGGCA CCGGCCACAT GGGCATCACC GCCGAGATCG TGGCCGAGCG GCACGGCATC AGCCGCGAGG ATCAGGACGC CTTCGCGCTG GAAAGCCAGA CCCGTGCCGC GCGCGCGCAG GAGGAGGGGC GGTTTGACGG CCAGATCGCC CCGGTGGAGA TCGCCTCCCG CAAGGGGCCG GTTTCCTTCG CGCGGGACGA ACATCCCAAG GCCACCACGG CCGAGGCGCT GGCGGGTCTG CGCCCCGCCT TCCAGAAGGG CGGCACCGTG ACGGCCGGCA ATGCGAGCGG CATCAACGAT GGGGCCGGCG CGCTGGTGCT GGCGCGCGAG GGGGCGGTGC CCGGCGCGCG TCCGCTCGGC CGGCTCATCG GCTATGCCCA TGCGGGTGTC GATCCCGAGG TGATGGGGCT GGGACCGATC CCGGCGGTGC AGGCGCTCTG CGCACGCACG GGCCTCTCGG TCGCGGACTT CGACGTGATC GAGTCGAACG AGGCCTTTGC CGCGCAGGCG CTGGCGGTGA GCCGCGCGCT CGACTTCGAT CCGGCGAAGG TCAATCCGAA CGGTGGCGCC ATCGCGCTCG GCCATCCGGT CGGCGCCACG GGGGCGATCA TCACGGTGAA GGCGCTGCAC GAGCTGCACC GCACCGGCGG GCGTCGCGCG CTTGTCACCA TGTGCATCGG CGGCGGGCAG GGGATCGCGC TGGCGCTGGA ACGGGTCTGA
|
Protein sequence | MSDILILSAV RTAIGGFGGA LAAVPPGDLA TTVTRAALER AGVEPDRVGH VVFGHVINTE PRDMYLSRVA AMQAGIPSGV PAMNVNRLCG SGVQAIVSAM QALMLGDAEV ALAGGAESMS RAPYVLASAR WGQKMGDTRA LDMMTGALNC PFGTGHMGIT AEIVAERHGI SREDQDAFAL ESQTRAARAQ EEGRFDGQIA PVEIASRKGP VSFARDEHPK ATTAEALAGL RPAFQKGGTV TAGNASGIND GAGALVLARE GAVPGARPLG RLIGYAHAGV DPEVMGLGPI PAVQALCART GLSVADFDVI ESNEAFAAQA LAVSRALDFD PAKVNPNGGA IALGHPVGAT GAIITVKALH ELHRTGGRRA LVTMCIGGGQ GIALALERV
|
| |