Gene Rsph17025_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0008 
Symbol 
ID5082269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp8786 
End bp9661 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content69% 
IMG OID640481563 
Productphosphoserine phosphatase SerB 
Protein accessionYP_001166225 
Protein GI146276066 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00197314 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCGTTG CCGTCCTCAT GACCGATCCC GCCTCTCCGG GCCTCGAGCG CGCCACCGTC 
GAGTCGCTGC GCAACGCCTG GGGCGGAGGC GATGCGCGCT GGCTGCAACC GGGGGTGGCG
GCGGAATTTC CCGTGTCTGC AATGCCTTCG AACCTCTGGC AGGTCTGGGA GGATCTGCAG
GCGCTGAAGG TGGATCTGGC CGTGGTTCCC GCCGAGGGCC GGCGCAAGAA GCTGCTTCTG
GCGGACATGG ATTCGACCAT GATCCGTCAG GAATGCATCG ACGAGCTGGC CGACGAGGCG
GGCGTTGGCG AATATGTCGC AGGCATCACC CGGCGCGCGA TGAACGGCGA GCTGAACTTC
GAAACCGCGC TGCGCGAACG GGTGGCGCTG CTGAAGGGCC TGCCGGCCTC GGTGATCGAC
CGGGTGCTCG AGACGCGGAT CCATTACATG CCCGGCGGCC GGGCGCTGGT GCAGACGATG
AAGGCCAACG GCGGACGCGC GGCGCTCGTC TCGGGCGGCT TCACCGCCTT TACCGCGAAG
GTCGCCGCGG GCCTCGGCTT TGACGAGCAC CGAGCCAACA TCCTCCATGT CGCGGATGGC
GCGCTCACCG GCACGGTGGC CGAGCCCATC CTTGGCCGGG AGGCGAAGCT CGCGGCGCTC
GAGGAGATCA CCGCCCGCAT GGGGATCGGG GTCGAGGCGG CCATGGCGGT GGGCGACGGG
GCGAACGATC TGGGCATGCT CAAGCGGGCG GGCGCGGGCG TGGCGCTGCA CGCGAAGCCC
GTGGTGGCGG CCGAGTGCGA CATCCGCATC AACCACGGCG ACCTGACCGC GCTGCTCTTC
GTGCAGGGCT ACGCCGAGGA CGAGTTCCGC ACCTGA
 
Protein sequence
MFVAVLMTDP ASPGLERATV ESLRNAWGGG DARWLQPGVA AEFPVSAMPS NLWQVWEDLQ 
ALKVDLAVVP AEGRRKKLLL ADMDSTMIRQ ECIDELADEA GVGEYVAGIT RRAMNGELNF
ETALRERVAL LKGLPASVID RVLETRIHYM PGGRALVQTM KANGGRAALV SGGFTAFTAK
VAAGLGFDEH RANILHVADG ALTGTVAEPI LGREAKLAAL EEITARMGIG VEAAMAVGDG
ANDLGMLKRA GAGVALHAKP VVAAECDIRI NHGDLTALLF VQGYAEDEFR T