| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0003 |
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| Symbol | |
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| ID | 5084062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2344 |
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| End bp | 3462 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640481558 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_001166220 |
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| Protein GI | 146276061 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.295963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000350231 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATCA GCATCGAGCG CGGCGCTCTG CTAAAGGCCG TGGGCCAGGC CCAGTCGGTC
GTCGAGCGGC GGAACACCAT TCCGATCCTC GCCAACGTGC TGATCGAGGC CGAAGGCGAC
ACCGTCTCGT TCCGCGCCAC CGACCTCGAC ATCGAGGTGG TGGACCGGAC GCCCGCGGTG
GTGGAGCGGC CCGGCGCGAC GACCGTTTCG GCGGTCATGC TGCACGAGAT CGTCCGCAAG
CTGCCGGACG GCGCGCTGGT CGGCCTGAGC GAGGATGCGG CCTCGGGCCG GCTGACGGTG
ACGGCCGGCC GGTCGGTATT CAGCCTTGCC ACGCTGCCGC GGGAGGATTT CCCCGTGATG
GCAAGCTCGG AATACAGCTC GAACTTCACC GCGCCGGCCC CCGTGCTGCG GCGCTTGTTC
GACAAGGCGA AGTTCGCCAT CTCGACCGAG GAGACGCGCT ATTACCTCAA CGGCGTCTTC
ATGCATGTGG CGACGGGCGA GGAGGGGCCG GTGCTGCGCT GCGTGGCGAC CGACGGCCAC
CGTCTCGCGC GGATCGACGC CCCGCTGCCC GAGGGTGCCG AGGGCATGGC CGGGGTGATC
GTGCCGCGCA AGACCGTGAA CGAACTGCGC AAGCTCCTCG ACGACGACGA GGCGCAGATC
AAGGTTTCCG TGTCGGAGAC CAAGGTGCGG TTTGCCACGC CGCAGATCAC CATGACCTCG
AAGGTGATCG ACGGCACCTT TCCCGACTAT TCGCGCGTGA TCCCGACGGG CAATGCGCGG
CGCCTCGAGG TGGATGCGCA GGAGTTCGCG AAGGCTGTGG ACCGGGTGGC CACCGTCTCG
TCCGAGCGGT CGCGGGCGGT GAAGCTGTCG CTCGACGAGG ATCGGCTGGT TCTGTCGGTC
AATGCGCCTG ATTCCGGCGC GGCCGAGGAG GAACTGGCCG TGGCTTATGG CGACGAGCGG
CTGGAGATCG GCTTCAACGC CAAGTATCTG CTCGAGATCG CAAGCCAGGT GGACCGGGAG
AACGCCGTGT TCCTGTTCAA CTCGTCGGGC GATCCGACGC TGATGCGGGA AGGCAACGAC
ATGTCGGCGG TCTATGTCGT CATGCCGATG CGCGTGTGA
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| Protein sequence | MKISIERGAL LKAVGQAQSV VERRNTIPIL ANVLIEAEGD TVSFRATDLD IEVVDRTPAV
VERPGATTVS AVMLHEIVRK LPDGALVGLS EDAASGRLTV TAGRSVFSLA TLPREDFPVM
ASSEYSSNFT APAPVLRRLF DKAKFAISTE ETRYYLNGVF MHVATGEEGP VLRCVATDGH
RLARIDAPLP EGAEGMAGVI VPRKTVNELR KLLDDDEAQI KVSVSETKVR FATPQITMTS
KVIDGTFPDY SRVIPTGNAR RLEVDAQEFA KAVDRVATVS SERSRAVKLS LDEDRLVLSV
NAPDSGAAEE ELAVAYGDER LEIGFNAKYL LEIASQVDRE NAVFLFNSSG DPTLMREGND
MSAVYVVMPM RV
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