Gene Saro_3831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3831 
Symbol 
ID5077979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp484991 
End bp486013 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content67% 
IMG OID640481554 
ProductLacI family transcription regulator 
Protein accessionYP_001166216 
Protein GI146276056 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.167541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCACG CCACAGACGC CGACGAGGCC GCCGATACCC GGGCACCGAC GCTCGATGAC 
GTGGCCAGCC GCGCGGGCGT TTCGACCGCA ACCGTCAGTC GCTTCGTCAA CAACCCGTCG
GTCGTCGCCG CCGCGACGGC CGAGCGCATC CGCGATGCGA TTGCCGCGAC CGGCTATATC
CCGAACCTGC TGGCGGGCGG GCTTGCGTCG AGCAAGTCCA AGATGGTCGC GGTGCTGATC
CCCTATCTCA CCGACTCCAT CTTCAACGAC ACGATCCAGG CGATGGTGGA GGAACTCTCC
GCCGCAGGGA CGACGGTGAT GCTGGGGCTG ACCGGCGTTT CGGAATCGCG GACCGAAGAC
CTGATCCGCG CAGCATTGAG CCGCCGGGTC GATGCCATCA TCTTCACCGG ACCGGTGACG
CCTCAGGTGG AACAGATGGT GCGGCGTTCG CCGGCGCTGT TCATCCAGGT GTGGGACCTG
CCCGAAGATC CCATCGGCAT CGCGGTCGGC TTCAGCCACG AGGCGGCAGG CAGCGCGGTG
GCGCGGTTCG TCATCTCGCG CGGCTACCGC AGGCCCCATC TCGTCACGGC GAAAGGATCG
CGCGCGCAGA TGCGGCGCAC CGGATTCGTC GGGGCGTGGG AAGCGGAGGG CTCGGGGCCG
TTCACCGAAT CCTCGGTCGA AGTGCCTTCG CGCTTTGGCC ACGCGCGGCG CATCTTTGCA
GAGATCCGCC GCCTTCCGGA AATGCCGGAC GTGGTGGTGT GCGGGTCTGA CCATCTGGCG
CAGGGCGTGA TTGTCGAGGC GCTTGCCGCG GGCCTCAAGG TGCCCGAGGA CATCGCCGTG
GTCGGCTTTG GCAACAGTTC GATAGCGGGC GAAATGCGAC CGACGATCAC GTCCGTCGAA
GTTGACGGCG CGCGGATCGC CCGCGAGGCC ATCGCTGCAA TCCGGCGCAA GGCCGACAAG
TCCACCCCGC CCGAGCGGTG GATTGACGTC GGCTTCCGCT TGATCGCGCG CGAAAGCGCA
TAA
 
Protein sequence
MNHATDADEA ADTRAPTLDD VASRAGVSTA TVSRFVNNPS VVAAATAERI RDAIAATGYI 
PNLLAGGLAS SKSKMVAVLI PYLTDSIFND TIQAMVEELS AAGTTVMLGL TGVSESRTED
LIRAALSRRV DAIIFTGPVT PQVEQMVRRS PALFIQVWDL PEDPIGIAVG FSHEAAGSAV
ARFVISRGYR RPHLVTAKGS RAQMRRTGFV GAWEAEGSGP FTESSVEVPS RFGHARRIFA
EIRRLPEMPD VVVCGSDHLA QGVIVEALAA GLKVPEDIAV VGFGNSSIAG EMRPTITSVE
VDGARIAREA IAAIRRKADK STPPERWIDV GFRLIARESA