| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3828 |
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| Symbol | |
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| ID | 5077976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 482563 |
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| End bp | 483726 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481551 |
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| Product | muconate and chloromuconate cycloisomerase |
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| Protein accession | YP_001166213 |
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| Protein GI | 146276053 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.126456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGC TCGCCAACCC CCAGATTCTC GGCATCGAGA CGATTCTTCT CGATCTGCCG
ACCATCCGTC CGCACGTGCT GGCCATGGCC ACGATGCACG CCCAGACGAT CTGCCTGGTT
CGCCTGACCT GCTCCGATGG TATCGTCGGA TTGGGCGAGG CGACCACGAT CGGCGGCCTC
GCATATGGCC CGGAAGCCCC GGAAACGATC AAGACCGCCA TCGACACCTA CTTCGCCCCG
CTTCTTGCCG GGCAGGATGC CACGCGCCCC GCCGCGGCCA TGGCGCTCGT CGCCCGCCAC
GTCGTCGGGA ATCACTTCGC CAAGTGCGCG ATCGAGACCG CGCTGCTCGA CGCACAGGGC
AAGCGACTTG GCCTTCCGGT CAGTGAACTC CTTGGCGGCC GCCGCGTGGA TTCGCTACCG
GTGCTCTGGA CGCTCGCCAG CGGCGATACC GCGCGCGACA TCGCAGAGGC GGAGCAGATG
CTCGACACGC GCCGACACGA CGCGTTCAAG CTCAAGATCG GCAAGCGCCC GATCGAACAG
GATGTCGCCC ATGTCGGCGC GATCAAGGCT GCGCTCGGCG ACCGGGCTTC GGTCCGCGTC
GACGTCAACA TGGCGTGGGA CGAACCCACG GCGCGGCGCG GTCTTGCCAT GCTGGCCGAT
GCGGGATGCG ACCTCGTCGA ACAACCGATC ATCCGCCACA ACCGCGATGG CATGGCCCGC
CTCGTCGCGC TGGGGCTGGT CCCGGTCATG GCTGACGAGA GCCTTACCGG TCCGGCCAGC
GCGATGGACT TCGCCCGCGC CGCCGCCGCC GATGTCTTCG CCGTGAAGAT CGAGCAGTCC
GGCGGGCTCG ATGCGGCGCG CGCGGTGGCG CAGATCGGCG ATGCGGCCTG CATCGGCCTT
TATGGCGGCA CCATGCTCGA AGGCGCCATC GGTACCATCG CATCGGCCCA CGCTTTTGCC
ACTTTCCCGG CGTTGAAGTG GGGCACCGAA CTTTTCGGCC CGCTCCTCCT CACGGAGGAA
ATCCTCGAGC GCCCCCTCAC CTACGCCGAT TTCTCGCTCG AAGTGCCGGC GGGGCCCGGT
CTCGGCATCG CCCTCGACGA AGACCGCGTC GAACACTTCC GGCGCGATCG CACCGCAACC
CAGTTCGCCT TGCAAGGAGC CTGA
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| Protein sequence | MTALANPQIL GIETILLDLP TIRPHVLAMA TMHAQTICLV RLTCSDGIVG LGEATTIGGL
AYGPEAPETI KTAIDTYFAP LLAGQDATRP AAAMALVARH VVGNHFAKCA IETALLDAQG
KRLGLPVSEL LGGRRVDSLP VLWTLASGDT ARDIAEAEQM LDTRRHDAFK LKIGKRPIEQ
DVAHVGAIKA ALGDRASVRV DVNMAWDEPT ARRGLAMLAD AGCDLVEQPI IRHNRDGMAR
LVALGLVPVM ADESLTGPAS AMDFARAAAA DVFAVKIEQS GGLDAARAVA QIGDAACIGL
YGGTMLEGAI GTIASAHAFA TFPALKWGTE LFGPLLLTEE ILERPLTYAD FSLEVPAGPG
LGIALDEDRV EHFRRDRTAT QFALQGA
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