| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3823 |
|---|
| Symbol | |
|---|
| ID | 5077971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | + |
|---|
| Start bp | 478201 |
|---|
| End bp | 478929 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640481546 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_001166208 |
|---|
| Protein GI | 146276048 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA AGATCTTTCC CAGCCCCAAA GCAGCGCTCG ATGGCCTGCT GTTCGACGGG
ATGACCATCA TGTCGGGCGG GTTCGGCCTG TCCGGCAATC CCGAAAGCCT CATTCCCGAG
ATCCGCGATT CCGGCGTCAC CGGCCTTACC GTCATTTCCA ACAATGCCGG TGCCGAAGGC
TTCGGCCTGT GGATGCTGCT GCAAAGTCGC CAGGTCCGGC GCATGATCTC GTCCTATGTC
GGCGACAACA AGCTGTTCGA GGAGCAGTAT CTGTCGGGCG AACTGGAGCT TGAGCTCAAC
CCGCAGGGCA CCCTGGCCGA ACGGATCCGC GCGGGCGGCG CGGGCATCCC CGCCTTCTAC
ACCCGCACCG GCGTCGGCAC CGTGGTCGCG GAAGGCAAGC CCGTCGAAGT GTTCGAAGGC
GAGGAATACG TGCGCGAAAC CTGGCTCCGC GCCGACCTGG CGATCATCAA GGCCTGGCGT
GCGGACACCT CCGGTAACCT GATGTTCCGC CGGACGGCGC GCAACTTCAA CCCGGTCATG
GCCACCGCCG CCCGGGTCAC GGTGGCAGAG GTGGAGGAGA TCGTGCCCGC AGGCACCTTC
GATCCCGACT GCATTCACAC GCCCGGCATC TACGTCGACC GCGTGGTCCT TTCCACCATC
AACGAAAAGC GAATCGAGAA GCTGACGACG CGCCCTAAAG TCCAGGAAGT TACGGAGGCG
CAGGCATGA
|
|---|
| Protein sequence | MSAKIFPSPK AALDGLLFDG MTIMSGGFGL SGNPESLIPE IRDSGVTGLT VISNNAGAEG
FGLWMLLQSR QVRRMISSYV GDNKLFEEQY LSGELELELN PQGTLAERIR AGGAGIPAFY
TRTGVGTVVA EGKPVEVFEG EEYVRETWLR ADLAIIKAWR ADTSGNLMFR RTARNFNPVM
ATAARVTVAE VEEIVPAGTF DPDCIHTPGI YVDRVVLSTI NEKRIEKLTT RPKVQEVTEA
QA
|
|---|
| |