Gene Saro_3821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3821 
Symbol 
ID5077969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp477038 
End bp477559 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content65% 
IMG OID640481544 
Productmethylamine dehydrogenase light chain 
Protein accessionYP_001166206 
Protein GI146276046 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02659] methylamine dehydrogenase light chain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGAT TTGATCGTGC GGCAGAATAC CTGGCGCGTT CCGCCGCACG TGGCACGTCG 
CGCCGTGGCT TTATCGGACG GCTCGGCGCT TTCGTAACCG CTACCAGCGC CGCCACGTTG
CTCCCGGTTT CGCGTGTCCG CGCCGAAAAG GCGCCGGTGC CGGTCCAGGT GCAGGAACAA
GGCGATCCAA CTTCGTGCGA CTACTGGCGC TATTGTGCGG TGGACGGTTT CCTTTGCGCC
TGCTGCGGCG GTTCGGCATC GTCCTGCCCG CCGGGGACGG AGCCTTCGCC CATCACATGG
CTAGGTACCT GCCGGAACCC GGCCGATGGC CGCAACTACG TGATCAGTTA CAATGACTGT
TGCGGCAAGG CCGCCTGCGG CCGGTGCAAT TGCAGCCGGG ATGAAGGCGC GACGCCAGTC
TACCAGCCAA CCACGGCAAA CGATCTCGAC TGGTGCCTCG GCACGCAAGC CGGCGTTGCC
TACCACTGCT CGCTTTCGGT GGTGACAGGC CCGGCGGATT GA
 
Protein sequence
MRRFDRAAEY LARSAARGTS RRGFIGRLGA FVTATSAATL LPVSRVRAEK APVPVQVQEQ 
GDPTSCDYWR YCAVDGFLCA CCGGSASSCP PGTEPSPITW LGTCRNPADG RNYVISYNDC
CGKAACGRCN CSRDEGATPV YQPTTANDLD WCLGTQAGVA YHCSLSVVTG PAD