| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3816 |
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| Symbol | |
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| ID | 5077964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 471857 |
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| End bp | 474226 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640481539 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001166201 |
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| Protein GI | 146276041 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.540841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCCA GGTGGAAGCT GACCACTGCG GTTGTGCTGG CGGCGACGGC TGCGACTTTC
GCAAACGATG CTGCGGCACA GGACGCAAAG CAGGAGCGGG CATCTGCCGA TAGCCCGGTG
GTGTTCGGCG ACATCGTCGT GACAGCGACC AAGCGTTCGG AGAACGTCGG CCGCGTGCCG
ATCGCGATTT CGGCCTTTTC GGGCGATCAG CTCAAGGCTC TCGGCATCAC CGAGACGACG
CAGATCACCC AGCATGTGCC GGGTCTGCAG CTCAACGCCT GGTCACCCAA CGTGACCATC
TTCAACCTGC GCGGCGTTTC GCAGAATAAC TTCACCGACT ATCTGGAAAG CCCCGTCGCG
GTCTATATCG ACGACGCCTA CATGGGTTCG ATCAATGGCG TGTCGGGCCA GTTGTTCGAT
GTCCAGCGCG TGGAAGTCCT GCGTGGACCG CAAGGAACGC TGTTCGGGCG GAACGCGACC
GGCGGGTTGA TCCACTACCT CTCCACCGAC GCCTCGAACG CAACGTTCAA TGGCTATGCC
ACCGCCGGCT ACGAGCGGTT CAACCGGCGC ATGCTGGAAG GCGCGGCGGG CGGTTCCATC
GCCGAGGGGC TGCGCTTCCG CGTCGCCGGA CGGATCGCCA GGGCCGATGG CTATGTGAAG
CCCCAGGCCG CATTGCCCGG AGTGTTCGAA AGCAACGGAC AGGCGCTGGG CGGAGAGAAC
GGCTGGGCAT TGCGCGGCAC GATCCAGGCC GACCTTGGCG AGCGCGGCAC GCTCGACCTG
TGGTACAAGC ATTCCGAGGA CAACGGGGTC GCCACCGGTG GCTACGTGTT CGACAACTGC
GACCTCACGG CGAGCGGCTA TTGCGCCACG GACGCGGCGG GGCTTTCCAA CGGCACCGGG
GGCGTGATCA ATGCGATCAC CGGTGAAAAG GCCAGTCCCT ACGCCAACTT CTCCAACCTT
CGCGGTTCGC TGGATCGGGA CATCGACGTC GCGCAGGCGA AGCTGCTCTA CGATCTGGGC
GGCGCAAAGC TGACCGCGAT CACCAACTAC ACCTGGCTCG ACAAGGTCTA TGCCGAGGAT
GGCGACGCCA CTCCGCTCGA CCTGATCGGT TTTGGCACGA CCGCAAAGTA CCGCCAGTTC
AGCCAGGAGC TGCGGCTGTC CGGCGACGCT CCGCGCTTTC GCTGGCAGGT GGGCGCCTAC
TACCTGGACA TGAAGATCCG CGGATCGAGC CTGACCAGCG GCGTCCCCGC GCTGAGCGCG
GCGGTGGCGA CCGGGCTGGA CGGGACCAAC CCGGCCATCG ACGACGACTA CAACCTGCGT
TCGAAGAACT GGTCGCTGTT CGGGCAGGTC GAATACGACC TCGCCGACAA GGTCACGCTG
GTTGCCGGCG GTCGTTATTC GAAGGACACC AAGCGTGTCG ATTATCGCTC GGCCGTGACG
TCCGGAGGGG CGACGGTCGA ACTGGGCTCT GACGAGAGTT TTGCCGCGCT GCGCCCAGGC
GTGGACCGGA TTTCCGATGG TGACTGGGCA GCACGTGTCA GCCTGAACTT CAAGCCGAAC
GCGGACACCC TCCTGTTCGC TTCGTGGAAC CGGGGGATCA AGGGCGGCAA CTTCACGTTG
AGCCCGGTCG TCGACGTCGC CAACTTCCAG CACGGCGGCG AAACGCTCAA TTCGTTCGAG
CTGGGTGCGA AGTGGGCCAA TGCGGACAAG ACCGTGCGCC TGGCCGCGAC CGCCTATCAC
TACATCTACG ATAACTATCA GGCCTTCGCC ATCATCAACT TCGTGCCGCA GGTTCGCAAC
AGCGACGCCC GCGCGACCGG TGTCGAGATC GAGGCATTCC TGCGCCCCGC GCCACACTTC
AACGTCAACC TTGGCGCGAC GTGGGAAACC AGCAAGGTCG ACTTCGTCTC GACCGCCGGG
ACGGCCGTGC TTGGCGTGCT GGTCCCCGGC GCACCCGCGC CGCAATACTG CACCGACCAG
GGCGACGGGA CTTATGGCTG CGCCTATCCC AGCGCCGGCG TGACCGACGC CGAACTCCCC
AACTCGCCGC GCTTCAGCGT CAACTACGTG CTGCGCTACG ATGTGGACAC CAGCTTCGGC
AACGTTGCCG CGCAGTTTGA CGGTGCGTGG TACGACGACC AGTTCCTCGA AGTGACCAAT
GGCGCCTCAT CGCGGCAGAG CGCCTACAAC GTGTCGAACG CCTCGCTGAC GTGGACATCG
CCGGACGACC GCTTCTCGGT CGAGGTCTAT GGCCGCAACG TGTTCGACAC GGTCTATCGG
CAGTACACGC TGAACCTCGG CCCGCTCGGG ACCACCAGCA TGTACGCCAA GCCCGCGACC
TATGGCGTCA GCGCAACGGT GAAGTGGTGA
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| Protein sequence | MESRWKLTTA VVLAATAATF ANDAAAQDAK QERASADSPV VFGDIVVTAT KRSENVGRVP
IAISAFSGDQ LKALGITETT QITQHVPGLQ LNAWSPNVTI FNLRGVSQNN FTDYLESPVA
VYIDDAYMGS INGVSGQLFD VQRVEVLRGP QGTLFGRNAT GGLIHYLSTD ASNATFNGYA
TAGYERFNRR MLEGAAGGSI AEGLRFRVAG RIARADGYVK PQAALPGVFE SNGQALGGEN
GWALRGTIQA DLGERGTLDL WYKHSEDNGV ATGGYVFDNC DLTASGYCAT DAAGLSNGTG
GVINAITGEK ASPYANFSNL RGSLDRDIDV AQAKLLYDLG GAKLTAITNY TWLDKVYAED
GDATPLDLIG FGTTAKYRQF SQELRLSGDA PRFRWQVGAY YLDMKIRGSS LTSGVPALSA
AVATGLDGTN PAIDDDYNLR SKNWSLFGQV EYDLADKVTL VAGGRYSKDT KRVDYRSAVT
SGGATVELGS DESFAALRPG VDRISDGDWA ARVSLNFKPN ADTLLFASWN RGIKGGNFTL
SPVVDVANFQ HGGETLNSFE LGAKWANADK TVRLAATAYH YIYDNYQAFA IINFVPQVRN
SDARATGVEI EAFLRPAPHF NVNLGATWET SKVDFVSTAG TAVLGVLVPG APAPQYCTDQ
GDGTYGCAYP SAGVTDAELP NSPRFSVNYV LRYDVDTSFG NVAAQFDGAW YDDQFLEVTN
GASSRQSAYN VSNASLTWTS PDDRFSVEVY GRNVFDTVYR QYTLNLGPLG TTSMYAKPAT
YGVSATVKW
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