Gene Saro_3815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3815 
Symbol 
ID5077963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp470336 
End bp471562 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content68% 
IMG OID640481538 
Productamidase 
Protein accessionYP_001166200 
Protein GI146276040 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAGAG TGGAGCAGGA GTCCGGCATG CAGGGCGATG CGGCAGCAGG CGTAACCACG 
GAGGCAGACC GCTTCGGCGC CCTCGTGCGC CCGTGCGATC TCGGCAAGGG CACGCTGCGC
GTCGCGATCA AGGATTGCAT CGACATTGCC GGTTGGCAGA CCCGGCAGGG AAGCGCCGTC
CTGGCCGACG TTCCGCCCGC CATCGCCAAT GCCGAGGTTG TCACGTGCAT CCTTTCCGAT
CCGCGCTGGC GCATCATCGG CAAGGCGCGG ATGCACGAAT TCGCATATGG CGTAAGCGGG
CTCAATCCGG CCTGTGGCAC CCCGATCAAC CCGTTCTGGC CGGATCGTAT TCCGGGCGGC
TCATCAAGCG GCAGCGCGGT GGCGGTGGCC TCGGGCCTCG CCGACGTGGC GATCGGGACC
GATACCGGTG GTTCGGTCCG GATGCCGGCC GCCTGCTGCG GAGTCATCGG GTTCAAGCCA
ACTTTCGGCC TCGTCAGCCG CCGGGGAGCG CACCCCGCGA AATCCTCGCT CGATTGCATC
GGCATCTTCG CGCGCGAGAT GGGTCTCGTC GAGGCGATGA TGGAGACTAT CGCGCCCGGC
TTCGTGCCCG CCACGCTATC GAGATCGCCC ACGCTCGGCC TGGTCACGCC CGGCACGAGC
AACGGCATCG CCGGCTACCT CGCCGCCGCG ATCGCGGGGG CGGGCATTGC CAACCGCAGT
ACGGCGCTCG ACGGCATGGA GGCCGCCTTT GCGGCCGGCA TGACGATTAT CGGACGCGAA
ACCTGGGCGG CGCTCGCGCC ATTCGTGTCG CATCCCGGCA TGGGCGATGA CGTGCGTACC
CGCCTCATGC GCGCATCTGC ATTGACGGAT GAGGACCTGG GCGCCGCCGA AGATGTCCGT
GCGGCTTTTC GCGATGGCGT GGATGCCGCG CTGGAGGGCG TCGATGCGCT TGTGCTGCCG
ACCCTGCCGG TTGTCCCGCC GCTACTTTCC GAAGCTGAAG ATGCCGCCGC ACTTCTGCCT
CTGACCCGGC TTGTGCGGCC CTTCAACCTC AGCGGGCATC CGGCAATCGC ACTGCCGCTG
CGGGCGGCCC ATGGCGTCCC GGTGTCTTTG CAGCTCGTGG GGCGCCACGG CGGCGATGCG
GCGCTTTGCG CTGTTGCGGC TTACGTCATT CAACGTCTCG GGGCGGCCGG TCTCTACGGC
AACCCTGGAA CCGATCGGGA GAATTGA
 
Protein sequence
MGRVEQESGM QGDAAAGVTT EADRFGALVR PCDLGKGTLR VAIKDCIDIA GWQTRQGSAV 
LADVPPAIAN AEVVTCILSD PRWRIIGKAR MHEFAYGVSG LNPACGTPIN PFWPDRIPGG
SSSGSAVAVA SGLADVAIGT DTGGSVRMPA ACCGVIGFKP TFGLVSRRGA HPAKSSLDCI
GIFAREMGLV EAMMETIAPG FVPATLSRSP TLGLVTPGTS NGIAGYLAAA IAGAGIANRS
TALDGMEAAF AAGMTIIGRE TWAALAPFVS HPGMGDDVRT RLMRASALTD EDLGAAEDVR
AAFRDGVDAA LEGVDALVLP TLPVVPPLLS EAEDAAALLP LTRLVRPFNL SGHPAIALPL
RAAHGVPVSL QLVGRHGGDA ALCAVAAYVI QRLGAAGLYG NPGTDREN