Gene Saro_3809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3809 
Symbol 
ID5077957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand- 
Start bp463791 
End bp464954 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content68% 
IMG OID640481532 
Productacyl-CoA dehydrogenase type 2 
Protein accessionYP_001166194 
Protein GI146276034 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAG CACCGATCCA GAACCCCGCA GCGCCCTCGG TCGCGCCGGA TGCGATGGAC 
GCGCTGCTCG ACGCGGTGCG CAGCCGGCGC GAGGAGTTCA GCGAGGGACA GCAGATCAGT 
GCCGACGTGG TCGAACTGAT GAAGCGGGCT GGCGTCTATC GCGCGTGCGT GGCGAAGGAA 
CTGGGCGGAG ACGAGGTTTC GCCCGGCACC TTCCTGCGCA TGATCGAACG GATCTCGGAA 
GCTGACGGTT CCGCCGGATG GGTCGCGAGC TTCGGGGTGT CTGCGGCGTA TCTCGCGTCG 
CTGCCCGTCG ACACGCTGCG CCAGATGTAT GCCGACGGGC CGGACGTGGT CTTTTCAGGC 
ATGATCTTCC CCCCGCAGGC TGCCCGGCCC GTGGGCGACG AACTGGAAGT CAACGGGCGC 
TGGAGCTGGG GCAGCGGCAG CACCGGGGCG GACTACATCG GTGTCGGCAT CAAGGTCGAA 
GGCGACGCTT CGACGGCAGG CCTTCCACTG GTGGCTGTGA TGCCGGCGCA CAAGGCGCGG 
ATCGTCCGCA ACTGGAACGT GATCGGCCTC AAGGGCACCG GCAGCCACGA TGTGGCGGTC 
GACAAGGTCA TGGTCCCGCG CGAATGGACC TTCGTGCGCG GTAGCGCGCC GAGCCTCGAG 
GGTGCGCTGT TCCGCTATCC TGCAATGGCG CTGGCTGCGC AGGTCCTGGC GGTGGTCGCC 
CTGGGCGTGG GGCGTGCCGC AATAGAGGAA CTCATGGCCT ATGCCGCCGG ACGGACGTCG 
ATCACCGGTG CGCCGACGCT GGCCAACCGT CCCAACGTGC AGGCCGACCT CGCCCGCGCC 
GAGGCCATGC TGCGTTCGGC CCGTGCGTTC TTCTATGAAA CGACCGAGGA TGCCTGGGAG 
GCGCTGCTGC GCGGCGACGA GCTGACGGCG AAGCAGGTGA CGCTGCTTCG GCTTGCAGCA 
AGCCATGCGG CGCGCGCGGG TTCCGATGTC GCGACGGCGG TCTATCGCAT GAGCGGAACG 
ACCGGCATTT TCGCCGGCCA TCCGGTGGCG CACTACATGC ATGACGCGAT GATCGTGCCG 
CAGCACGCGT TCCTCGCCGA TGGCACCTTC GAAAGCGCGG GCAAGGTCTT GTTTGGTCTG 
CCATCGCCCG CCGGATTCCC CTGA
 
Protein sequence
MATAPIQNPA APSVAPDAMD ALLDAVRSRR EEFSEGQQIS ADVVELMKRA GVYRACVAKE 
LGGDEVSPGT FLRMIERISE ADGSAGWVAS FGVSAAYLAS LPVDTLRQMY ADGPDVVFSG 
MIFPPQAARP VGDELEVNGR WSWGSGSTGA DYIGVGIKVE GDASTAGLPL VAVMPAHKAR 
IVRNWNVIGL KGTGSHDVAV DKVMVPREWT FVRGSAPSLE GALFRYPAMA LAAQVLAVVA 
LGVGRAAIEE LMAYAAGRTS ITGAPTLANR PNVQADLARA EAMLRSARAF FYETTEDAWE 
ALLRGDELTA KQVTLLRLAA SHAARAGSDV ATAVYRMSGT TGIFAGHPVA HYMHDAMIVP 
QHAFLADGTF ESAGKVLFGL PSPAGFP