Gene Saro_3801 details

Gene Information

• Locus tag: Saro_3801
• ID: 5077949
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Novosphingobium aromaticivorans DSM 12444
• Kingdom: Bacteria
• Replicon accession: NC_009427
• Strand: -
• Start bp: 450937
• End bp: 451479
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640481524
• Product: regulatory protein, LuxR
• Protein accession: YP_001166186
• Protein GI: 146276026

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.05501
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAGCA GATCATTGCC AAACGAAATC CTGTGGTTCT TCAACGCGAC GAACCGCATA 
TTCCCCAACC ACCTCAAGGC AATCTGGGAA GGGGATGTCC TGATGGCAGT CCATCGCACC 
GCAACGGGCC GGACTGCCGA CCAGATGCTG GGACGTTTCC TCAGCGAAAG ACCGGCAGCC 
GTCGGAGGCC CCATGACCCG CGTACCTATC GCGATGACCG GCTACCCTCC GATAGTCGCG 
CGCTATGTCG CCCTGGACAT CCTCGAATGG GACCGGGCCT TCCTGTTCGG TTACGTCCAG 
GTTCCCCAGG CGGCAATTTC GGAAGAAGAC CTCGCCTCCA TCTCGCGGCT GTCGCTGACC 
CGCCGCGAGG CCGACATTGC CTTGCAGGTC AGCACGGGCT CCTCGCTGAC GCAGATCGCG 
CGGGACAGCC AGAGCTCGAT CACAACGACG CGCAATCTTC TCAAGAGCGC GTTGCGCAAG 
ACCGGTTGCG GCAGCCAGCA GGAATTGGCG ATCCTCGTCC ACGCCCTGCT CAACCGGTAC 
TGA 

 

Protein sequence

MTSRSLPNEI LWFFNATNRI FPNHLKAIWE GDVLMAVHRT ATGRTADQML GRFLSERPAA 
VGGPMTRVPI AMTGYPPIVA RYVALDILEW DRAFLFGYVQ VPQAAISEED LASISRLSLT 
RREADIALQV STGSSLTQIA RDSQSSITTT RNLLKSALRK TGCGSQQELA ILVHALLNRY