| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3788 |
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| Symbol | |
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| ID | 5077936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 432065 |
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| End bp | 433180 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481511 |
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| Product | multidrug resistance efflux pump-like protein |
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| Protein accession | YP_001166173 |
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| Protein GI | 146276013 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGCC TCAATGCCAA TATCGTTGCC TTCCCCACCC TCCGTTCGCT GGGCATCCCC
CGTGTCACGC GCGCGCTCGG CTGGATGATC GGCATCGCCC TGCCACTGAT CGCCGCGCTG
CTGCTGCTTG TGCCCTGGGT CCAGACCGCT CCCGGACGGG GCGAGGTCAT CGCACTTGAT
CCGCAGGACC GCGTGCAACA GGTCACCGCG CTCGTGCCCG GCCGGGTCGA ACGCTGGTAC
GTCGTCGACG GGCAGCAGGT CCACAAGGGC GATCCCATCG CCCGGATCAT CGACAACGAC
CCCGATCTCC TCACCCGTCT CGCGGCAGAG CGCGCGCAGG TGCTTGCGCA GATCGCCGCC
GCCGAACAGG CAATGGCGGT TGCCCGGATC GACGTCGGCC GTTCAGGCCA GCTCCTTGCC
GATGGCCTTG CCGCCCGTCG AGACTACGAA AATGCACAGA TCAAGGTCGC CGAACATGGC
GCGAAACTTG CCGAAGCCCG CGCCAAGCTC AGCAAGGTCG ACATCGCTCT CGGTCGCCAG
TCGGCGCAGG TCGTCCGCGC CCCGCGCGAC GGGCGGATCC AGTCGCTCAA CACCGCGGCC
GGCGCCACGC TTGTCAGCGC GGGCGACTGG CTGGCAACGC TTGCGCCGGA CCGGGCGGAG
CGCGTGGCCG AACTCATGGT CGATGGCCGC GACGTCGCCC TGGTACGCAA GGGACAGCCC
GTGCGCCTGC ATTTCGAAGG CTGGCCCGCC ATCCAGTTCA GCGGCTGGCC TTCGGTCGCC
CAGGGCATGT TCGATGGGCG CGTCCGCGCG ATCGATCCGT CGGCACAGCC CAACGGCCTG
TTCCGCGTGC TGGTCGAACC CATGCCCGGC AAGCCGGCCT GGCCCGACGA CAACTTTGTC
CGCCTCGGCT CGAAAGTGCG GGGCTGGGTC CAGATGGAAA CCGTCACCAT CGGCTACGAA
CTGTGGCGCC AGCTCAACGA CTTCCCGCTC GAATTTCCCG CGCCGGTCGA TGCCGGACCG
CGCAAGGGCG CGGCCAAGGG TCTGGCCGAC AAGGACGCCG CAAAGGCCAA GGAAGGCGCG
AAGTCGGGAT ATGAGGACGG GGAGGAAAGC AAGTGA
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| Protein sequence | MASLNANIVA FPTLRSLGIP RVTRALGWMI GIALPLIAAL LLLVPWVQTA PGRGEVIALD
PQDRVQQVTA LVPGRVERWY VVDGQQVHKG DPIARIIDND PDLLTRLAAE RAQVLAQIAA
AEQAMAVARI DVGRSGQLLA DGLAARRDYE NAQIKVAEHG AKLAEARAKL SKVDIALGRQ
SAQVVRAPRD GRIQSLNTAA GATLVSAGDW LATLAPDRAE RVAELMVDGR DVALVRKGQP
VRLHFEGWPA IQFSGWPSVA QGMFDGRVRA IDPSAQPNGL FRVLVEPMPG KPAWPDDNFV
RLGSKVRGWV QMETVTIGYE LWRQLNDFPL EFPAPVDAGP RKGAAKGLAD KDAAKAKEGA
KSGYEDGEES K
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