| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3785 |
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| Symbol | |
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| ID | 5077933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 427226 |
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| End bp | 429472 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640481508 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001166170 |
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| Protein GI | 146276010 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.440403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCGA CACAACACCG CGTTCGCGCG CACGTTGCAC TAGGTGCGGG ACTTGCCGCA
CTTTCATCCA CGGTCGCCGT GGCCCAGCCC CCCGGCGAAA CGATTGAAGG CGCTGGTGAA
ATCGTCATCA CCGCACAGAA ACGGCCGGAA CTCGCAGGCG AAGTGCCGCT GTCCATTTCG
GTGATCGACG GCGAGACCTT GCAGGCTGCC CGGCTCAGTC AGGCCGACGA TATCGCGGCA
TTGGTCCCCA ATCTCCGTTT CAGCGCAACG GTCGGGGAAA ACACGCCGAT CTTCGCGCTG
CGCGGAGTGT CCATGTCGGA CTTCAGCCTC AACCAGGCCG GACCGGTCGC GACCTATTAC
GACGAGGTCT ACAAGGGCAA CTTCGCCTTC CTTGGGGTCC AGCTTTATGA CCTTGCACGG
ATCGAGGTCC TGCGCGGACC GCAGGGCACG CTCTACGGCA AGAACACCAC TGGCGGCGCG
ATCAACTACC TTGCCGAACG GCCACGGTTC GAGAACGGGG GGTACCTGAA AGCCGGCATC
GGAAACTTCG GGAGAGCCGA AGGCCAGGGC GCGTTGAACC TCGCCATCTC GTCCACGCTG
GCCGCGCGCA TCGCCTTCAC CGCCGCGCGC GCCGACGGTT GGTTCCGCAA CCGGCTGGCG
GGTAGCCCGA ACCTTTCAGC CACCCGCGAG TACGGCGTGC GCGGCTCGAT CCTGTGGAAG
CCGTCGGATA GCGCCGAACT GGTCCTGCGC CTGTCGACGA GCCTCCAGAC GCCGCAGAAC
TACGGCACCT ATTCGGTACC GGGGCCCGGC GGCACAGGCG CGGGCGTCTA TGAAGCATAC
GGTCGGGGCA TGAGCTACTT TCGCACCGGC ATCGGCAAGC GGGAAATCGA AGCGAACTTC
ACGCCGCGTC GCCGCGCCCG CACATGGTCG GCGGCATTGA CCGGCACGTT CCGGCTGAGC
GACAACCTGT CGCTCGTGTC CGTGACGGGA TGGGACCGCG GCAGCCTCTT CGTGCCGGAG
GACACGGATG GCAGCCCGAC CCGGACCCTC GAAATTCCCT ACACGGACCG CGGCACGCAG
TTCGGGCAGG AACTCCGCCT TGCATACGAC GGCGATGGAG CGCTGAGCCT GATCCTGGGC
TTGCACCACC ATCGCGAGGA CCTGTTCAAT GCGACCGACC TGAACTTCTG GACCGACCTC
GACGTCGATG GCAACGGGCG GGTCGACGTT GATGACTGCT CCGCGAACGC CAGCCTTATG
GCCTGTGCCA TTTCCAACCG CTTCGACCAG CGCAAGCGGA GCTGGGCACT GTTCGGCGAT
GCGCACATGA AGCTCGGTAC CAGGACGGGC CTGCGGGGCG GGCTGCGCTT CACCCGGGAC
ATCGGGCTGC AGGCGGGGCT GACGTCGCAA TTACGCGGCG TCGATGGCGT GCTTGTCGCA
ACGCCCATCC TCCCGCTCGA CCGCAGCTTT GCGGGCAGCA ACCTTTCCGG CAAGATCGGT
ATCGACCACA AGCTGGCCGA TGGCACCATG TTCTTCGCCA GCTACAGCCG GGGCTACCGG
GCAAGCGGGT TCAATGCGCA GGCTTTCTTC GATGCCGCCG AAGCCGGTGT GGCCCGACCC
GAGACGATCG ATGCGTTGGA AGCTGGCGCC AAGACGCGAT TGGCCGGTAA CGCGCTGGCG
GTCGCGGTGA CCGGCTTTCA CTACATCTAC CGCAACCAGC AGTTCCTTTC GGTCGACCCT
GCCGATGCGA CGCAGACACT CGTCAATCTC GACCGGTCGC GCATCTATGG GGCCGAGATA
GAGCTGGAGG CTCGGCCCAC GTCCGAGATT GCGGCTCAGA TCGGCGTCGG CATCCTGCAT
GCGCGGGCAA CGCAAGGCAT GATCGGCGGC CTCGACGTGA GCGGCCACAG CCTTTCCAAC
GCGCCCTCGC TTACTCTCAA CGCCGCAGTG GCTGCGACGA TATGGGAACG CGGGCCGGCG
CGCATGGCGC TGCGCGGGGA CGCCAGCTAC ACGTCCTCGC AGTTCTTCGA GATCGTCAAC
ATCCCCCGCC TGCGTCAGCC CGGATATGCG CTGCTTGGCG CAAGTGTCGA TTACGCGCGC
GGTCCGATGA TCCTATCGAT CTGGGGCAAG AACCTTGGCG ACAAGGTCTA TTTCACCTCG
AGCATCGATC TTTCTGGATT CGGCTTCGAT TACAATCACG TGGGGACACC CCGCACCTAT
GGAGCGACCG CCAGGGTCAG CTTCTAG
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| Protein sequence | MSATQHRVRA HVALGAGLAA LSSTVAVAQP PGETIEGAGE IVITAQKRPE LAGEVPLSIS
VIDGETLQAA RLSQADDIAA LVPNLRFSAT VGENTPIFAL RGVSMSDFSL NQAGPVATYY
DEVYKGNFAF LGVQLYDLAR IEVLRGPQGT LYGKNTTGGA INYLAERPRF ENGGYLKAGI
GNFGRAEGQG ALNLAISSTL AARIAFTAAR ADGWFRNRLA GSPNLSATRE YGVRGSILWK
PSDSAELVLR LSTSLQTPQN YGTYSVPGPG GTGAGVYEAY GRGMSYFRTG IGKREIEANF
TPRRRARTWS AALTGTFRLS DNLSLVSVTG WDRGSLFVPE DTDGSPTRTL EIPYTDRGTQ
FGQELRLAYD GDGALSLILG LHHHREDLFN ATDLNFWTDL DVDGNGRVDV DDCSANASLM
ACAISNRFDQ RKRSWALFGD AHMKLGTRTG LRGGLRFTRD IGLQAGLTSQ LRGVDGVLVA
TPILPLDRSF AGSNLSGKIG IDHKLADGTM FFASYSRGYR ASGFNAQAFF DAAEAGVARP
ETIDALEAGA KTRLAGNALA VAVTGFHYIY RNQQFLSVDP ADATQTLVNL DRSRIYGAEI
ELEARPTSEI AAQIGVGILH ARATQGMIGG LDVSGHSLSN APSLTLNAAV AATIWERGPA
RMALRGDASY TSSQFFEIVN IPRLRQPGYA LLGASVDYAR GPMILSIWGK NLGDKVYFTS
SIDLSGFGFD YNHVGTPRTY GATARVSF
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