| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3767 |
|---|
| Symbol | |
|---|
| ID | 5077915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | + |
|---|
| Start bp | 404342 |
|---|
| End bp | 405880 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640481490 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001166152 |
|---|
| Protein GI | 146275992 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0143855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGATC CGCTGCCCGC CACCATACCC CATGCCGCGC AGGCGGCGGC GGCCACCTGG
CCCGATGCAC CTTCCGTGCT CGAAAACGGC GAAGTCTGGA GCTTTGCCGA GCTGTGGCAG
CGCAGCCGCG CGGCGGCTTC GGCGCTGATC GCGCGGGGCA TAAAGGCCGG AGATCGCGTG
GCGATCTGGG CGCCGAACTC GCGCGAGTGG ATCGTTGCGG CGATCGCGAC CATGGCGTGC
GGGGCGGCGG TGGTGACGCT CAACACGCGG CTCAAGGGCC GCGAGGCGGG CGACATCTTG
CGGCGCACCA ATGCGCGGCT TCTGTTCACG GTCGAGGGCT TTCTCGGCAT CGACTATCGC
GCGCTGATCG TGGACGAGGA TCTGCCGGCG CTTGAAGGAA CAGTCCTGCT TGACCGGGAA
TTCGACGCTT TCATGCGTGA CGGCAGGGGG GCGGGCGATC CGGCGGTCGA TGCGGCGATG
GCGCAGATCG ATGCCGATAC CGTGTCGGAC ATCCTGTTCA CCAGCGGCAC GACAGGCAGC
CCCAAGGGCG TGTTGATGAC TTATGGCCGC GTCCTGCCTC AGGCGGCGGT GTGGTGCGCG
AACACCCGCC TGACCGAGGG CGACCGTTAC CTGATTGCCA ACCCTTTCTT CCATTCCTTC
GGGATGAAGG TGGGCTGGGT CGCGTGCATC CTCGCCGGTG CCGTGGCAGT GCCCATGCTG
CAATTCGACG TGGGTCAGGC GATTGATCTG ATCGAGCGCG AGCGCATCAC GTTCATGCCC
GGTCCGCCGA CGATCTTCCA GATGCTGCTG GCCGAACTCG ACAAGCGCAA GTGGGACTGT
TCCTCGCTGC GGGGAGGAAC GACCGGCGCG GCGACAGTGC CGCCCGCACT GGTGGAGCGC
ATCCGCAACG ACCTGGGCAT GGTGGACCTC ATCACCGCCT ATGGCATGAC CGAATGCGTC
AACATCACGA CGTGCGTGCC CGGTGACGAT GCCGAGACCA TTGCACGGAC CTGTGGCAAG
GCGTTTCCGG GCAACGAGGT GCGCATCGCC GACGAGAACG GGAACGAACT GCCAAGGGGC
GAGGCGGGAG AGGTTCTGGT GCGGGGGCAG GGCGTCATGC TCGGTTATCT CGACAACCCG
GAAGCCACTG CCGAGGCGAT CGACGCAGCA GGCTGGTTGC ACACGGGCGA CGTCGGCACG
ATGGACGAGC GCGGTTATGT GCGCATCACC GACCGGATGA AGGATCTCTA CATCTCGGGC
GGGTTCAATG TGTACCCGGC GGAAGTCGAA AAGCTGCTGG CCGAGCATCC GGCCATCGGA
ATGGCTGCGG TCGTCGGCGT TCCGGACGAG CGACTGGGCG AGGTGGGGCG CGCCTTCGTG
GTCCTGCGGC CCGGCGCGAG TGCGACCGAG GCCGAACTTG TCGCCTGGTC GCGCGAGAAC
ATGGCGAACT ACAAGGTGCC GCGCAGCTTT GTGCTGGTCG ATGACCTGCC CCGCAACGCG
TCGGGCAAGG TGCTGAAGAC CGAACTGCGG GCCGGATAA
|
|---|
| Protein sequence | MLDPLPATIP HAAQAAAATW PDAPSVLENG EVWSFAELWQ RSRAAASALI ARGIKAGDRV
AIWAPNSREW IVAAIATMAC GAAVVTLNTR LKGREAGDIL RRTNARLLFT VEGFLGIDYR
ALIVDEDLPA LEGTVLLDRE FDAFMRDGRG AGDPAVDAAM AQIDADTVSD ILFTSGTTGS
PKGVLMTYGR VLPQAAVWCA NTRLTEGDRY LIANPFFHSF GMKVGWVACI LAGAVAVPML
QFDVGQAIDL IERERITFMP GPPTIFQMLL AELDKRKWDC SSLRGGTTGA ATVPPALVER
IRNDLGMVDL ITAYGMTECV NITTCVPGDD AETIARTCGK AFPGNEVRIA DENGNELPRG
EAGEVLVRGQ GVMLGYLDNP EATAEAIDAA GWLHTGDVGT MDERGYVRIT DRMKDLYISG
GFNVYPAEVE KLLAEHPAIG MAAVVGVPDE RLGEVGRAFV VLRPGASATE AELVAWSREN
MANYKVPRSF VLVDDLPRNA SGKVLKTELR AG
|
|---|
| |