Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3744 |
Symbol | |
ID | 5077892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | + |
Start bp | 382668 |
End bp | 384929 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640481467 |
Product | TonB-dependent receptor |
Protein accession | YP_001166129 |
Protein GI | 146275969 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAACA GTATGGCGCG TGGCGCTTCG TGGCTCGCAG TGGCAGTGGC TGCCGGCGGT CTGGCCCAGG TACCAGCGCG CGCGCAGGAC GCGGCTGCGG TCGACGGCGC GGAAGAAATC GTCGTCACCG CGCGCAAGAC CACAGAACGT CTGCAGGACG TGCCGATCGC CGTTACCGCG CTGTCGGCCA GCGCCCTCGA TGCGCGTGGC ATCGGTTCGG TGACCGATCT CCAGCAGGTC GCCCCCAATC TCCAGTTCAC GCCCGGTACC GGCGGTAACG GCGGCGCCAT CGCGCCGTTC ATCCGCGGCG TGGGCGAAAA CGATTTCATC ATCACCGCGG ACCCCGCGGT CGGCACGTAT TTCGACGGCG TCTATGTCGC CCGCACCTTC GGTGCCTCGC CCGAATTGCT CGACGTAGAG CGGGTCGAAG TGCTGCGCGG ACCGCAGGGC TCGCTGTTCG GCAAGAACAC CGTGGGCGGC GCGATCAACG TCGTTACCCG CATGCCCGGT GACACGGCCG AGTTCGAGGG CGATGTCCGT TACGGCTCCT ACAACGACTT CCGCGTCCGT GCCCGCGCCG CGCTTCCGCT TGGTGGCGGC TTCTCGCTCG GCCTTTCGGG GCTTGGCGAA TGGGGCGACG GTTGGCAGCG CGTGCCCTCG GGCAAGGATC TTGGCAACCG CAACGTGGTG AATGGCCGCG CGGTCCTGCG CTACCAGGGC GGCGCCTTCG AGGCGATCGC ACAGGTTGAC GGCCTGCGTC GCCGCCAGAA CTCGGCCGCG CACAGCATGC TGGACTTCAC GCCGACGTTC TTCTCGACGC TGCAATCGCT GTTCATCGCG CCCTGTTGCA CTGTGCCGGA TCGCATCGAC CGGACCGACA CGACGCCCTC GCTCAATCGC GACCACGCGG ATGCGGCAAA CGCCTCGCTT ACGCTGAGCT ACGACCTTGG CGGCGCGAAG CTCAAGTCGA TCACCGCCTA CCGCTGGGTC CATGCCCAGT TCGGCCGCGA CGGTGATGCC TCGGCTGAGG TCAACTACGC CGGCGATTTC CACAATGAAC GCGCCCGCCA GTTCAGCCAG GAACTGCAGT TCACCACCTC GATCTTCGAT CGCGGCTCGC TCCTTCTTGG CGCGTACTAT TACCGCGAGC GGACGAAGGA TCTCACCCGC CTCGTCGTGG CCGACGGTCT CTACGACGCA TCCGGCTTTG CTGAATTCTC GACCGACGTG CTCGAACTGC CGCCCGAATT CCTCGATTTC AACATCGACT TCGACAACCG CCAGACGACC ACCAACTTTG CCCTGTTCGG CAACGCCACC GTGCCTCTTG CCGAAAGGCT GACGCTGGAA CTGGGCGGTC GGTACACGCA CGAGAAGAAG GCGTTCTACC AGGCCGCGAA CCGGGTCTAC AGCAACACCC CGCTGTTGTT CGGCACGCCT TCCTACGAGC TTGAACAGAG CTGGGATGCC TTCACCCCGC GGGTCTCGCT CAGCTACAAG CTGCGCGACG ACGTTCTTGC CTATGCTTCC TGGTCGCAGG GCTTCCGCAG CGGCGGGTTC AACGGTCGCC CGACCTCGCT AGAGGAAATC GGCTCCTACG ATCCCGAGCA TCTCGATGCC TTCGAGGTCG GCGTGAAGAG CCAGTTCGGC CGCATCCTCA CGCTCAACCT CGCCGTCTTC CGCAACCAGT ATCGCGACCA GCAGCTCCTC ATCAGCACGG TCAGCGAGAA CACGGGCCTG ATCGTCGTTC GTACCGAGAA CGCCGGCAAG TCGCGCATCC AGGGAATCGA GCTGGAGGGC ACGGTCCGCG TCTCGCCGCG CTTCCGCATC GACGGTTCGC TCGGCCTGCT CGATGCGAAG TACCAGAAGT ACGTCTCGGT CATTGCCGGC GTTCCGACCG ACGTCAGCGG GCGCAAGCTG AAGCAGGCGC CCGAAGTGAC CGGCAGCCTC GGGATGTCCT ATACGCTTCC GCTTGGCGAG CGGATGGACG CGACCTTCCG TGCCGATGCG ACGTATCGCA GCGCGAACTT CATCGATGTG GAGAACACGC CCGAACTGCG CGCGCCGGAT CATGCGATCC TCAACCTCAG CACCACCCTG CGCCTGCCGG TGGACGGTCT CTCGCTGCGG CTGGCGGTGG ACAACGTGAC CAATCGCCGG ATCATCGTTG CGGGTTATGA TGCCCGGACT TCGTTCGGCT TCCTCGAAGG CTACTTCAAC GAACCGCGCC GCTACTGGGC GACGCTCTCG TTCAGGCGCT GA
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Protein sequence | MRNSMARGAS WLAVAVAAGG LAQVPARAQD AAAVDGAEEI VVTARKTTER LQDVPIAVTA LSASALDARG IGSVTDLQQV APNLQFTPGT GGNGGAIAPF IRGVGENDFI ITADPAVGTY FDGVYVARTF GASPELLDVE RVEVLRGPQG SLFGKNTVGG AINVVTRMPG DTAEFEGDVR YGSYNDFRVR ARAALPLGGG FSLGLSGLGE WGDGWQRVPS GKDLGNRNVV NGRAVLRYQG GAFEAIAQVD GLRRRQNSAA HSMLDFTPTF FSTLQSLFIA PCCTVPDRID RTDTTPSLNR DHADAANASL TLSYDLGGAK LKSITAYRWV HAQFGRDGDA SAEVNYAGDF HNERARQFSQ ELQFTTSIFD RGSLLLGAYY YRERTKDLTR LVVADGLYDA SGFAEFSTDV LELPPEFLDF NIDFDNRQTT TNFALFGNAT VPLAERLTLE LGGRYTHEKK AFYQAANRVY SNTPLLFGTP SYELEQSWDA FTPRVSLSYK LRDDVLAYAS WSQGFRSGGF NGRPTSLEEI GSYDPEHLDA FEVGVKSQFG RILTLNLAVF RNQYRDQQLL ISTVSENTGL IVVRTENAGK SRIQGIELEG TVRVSPRFRI DGSLGLLDAK YQKYVSVIAG VPTDVSGRKL KQAPEVTGSL GMSYTLPLGE RMDATFRADA TYRSANFIDV ENTPELRAPD HAILNLSTTL RLPVDGLSLR LAVDNVTNRR IIVAGYDART SFGFLEGYFN EPRRYWATLS FRR
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