| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3741 |
|---|
| Symbol | |
|---|
| ID | 5077889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | + |
|---|
| Start bp | 379356 |
|---|
| End bp | 380303 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640481464 |
|---|
| Product | dehydrogenase, E1 component |
|---|
| Protein accession | YP_001166126 |
|---|
| Protein GI | 146275966 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.418325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGGC CGGACCCTGC GCTGCTTGAA AGCATGTTTC ACAAGTTGGC CGTCTCGCGT
GCGGTCGAGA CGTTGATGTT GCGCCACACG CGGGAAGAGC GCTTCTCCGG TTGGTGGCAT
CCGGGTGAGG GGCAGGAAGC CGCGCCGATC GGCGCCACGG CTGCGCTCGA AGCTGACGAT
TACGTCTGGT ATCAGGGCCG CGGCTGCGCC TGGGCAATCG GAAAGGGCAT GGACCCGCTA
CCAATCCTTG GCGACCTCCT TGGCAAGACG AATGGCGCAA CGGGCGGCAA GGGTGGTGGA
GTCCCGCACT GGGCAGACTA CAGCCTTGGC ATCATGGGCG AGGGCGCGAC GCTTGGTTCC
GTCTATCCGC TTGCGGCCGG TTCTGCCCTT GCCTCGAAGA TCCGCAAGGA CGGCCGTGTC
AGTCTCGCCA ACTTCGGTGA CGGCACTGCC TCGCGCGGGA CGTTCCATGA AACCATGATG
CACGCGGCCG CTTGGAAGTT GCCACTGATC TACTTCTGCG AGAACAACGG CCTCCTTGTC
GGCACGCGGA CCGAGCAGGT CTCGGCGACC GCCGACATCG CGAACCTTGC CAAGGGCTAT
GGCATTCCCG GGGTGATCGT CGACGGGCAG GACGCGGTCG CCGTCTGGGA AGCAACGCGC
GAAGCGGCGG CCCGCGCCCG GGCCGGGAAG GGGCCGACCC TCATCGAGGC AAAGGTTACC
CGCAAGCACG GCCACTACGC CGGCGATCCT CAGCACTATC GCGACCCGGA CTATCTCAGG
GATTATCGCG ATCCGCTGGA CCTTCTCGCC GCAAGGCTGG CCGGAAACGT TGCTGCGCGC
ATCGTCGAGC AGGCCGATGC GGAAGTGGCT GCCGCTTATG AAGCGGCCAG AGCTGCGCCC
GAACCCGATG TCTCGGTGAT CGAGAGGGAC CTTTACCATG TCGTCTGA
|
|---|
| Protein sequence | MSGPDPALLE SMFHKLAVSR AVETLMLRHT REERFSGWWH PGEGQEAAPI GATAALEADD
YVWYQGRGCA WAIGKGMDPL PILGDLLGKT NGATGGKGGG VPHWADYSLG IMGEGATLGS
VYPLAAGSAL ASKIRKDGRV SLANFGDGTA SRGTFHETMM HAAAWKLPLI YFCENNGLLV
GTRTEQVSAT ADIANLAKGY GIPGVIVDGQ DAVAVWEATR EAAARARAGK GPTLIEAKVT
RKHGHYAGDP QHYRDPDYLR DYRDPLDLLA ARLAGNVAAR IVEQADAEVA AAYEAARAAP
EPDVSVIERD LYHVV
|
|---|
| |