Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3713 |
Symbol | |
ID | 5077861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | + |
Start bp | 349820 |
End bp | 352384 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640481436 |
Product | TonB-dependent receptor |
Protein accession | YP_001166098 |
Protein GI | 146275938 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000001326 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATAAGG GGTTTCCAGT TAAATCGAGG GCGATGAAGG CCCGTTCGGC CATGCTTCTG GCAGGCGCGG CCCTTGGCGC AGGCATTGCG CCGCACGCGG CGTTCGCGGC CGATGCGGTA GAGCAGGCCG CTGAAGGCAG TGCACCGTCC AGCGCGGAGA TCATCGTCAC CGCCAACCGC CGCGAGGAAC GCGCACAGGA CGTGCCGATC TCGATCACCG CGATCACTGC GGAAAGCATC CGCGAGCGCG GCCTTACCCA GCTCCAGGAT CTCCAGGCTT CGGTGCCTTC GCTCGTCGTC GGCCCCAACG GTCAGGCCTC GCGCGATGTC ATGTCGCCCT CGATCCGTGG CCAGAGCGCT TCGTTCCAGG GTTCGCCGGC TGTCGTCGTC TACATGAACG AAGTGCCGCT GCCTTCGGCG ATCACGCTTT CGGGCCAGGG CGGCCCGGGC TCGTTCGTCG ATCTCCAGAA CGTTCAGGTA CTTGCCGGTG CGCAGGGTAC GCTGTTCGGC CGCAACACGA CCGGCGGCGC GATTCTGCTT ACCCCGGCGC GCCCGACCGA CCGGCTCGAG GGCCACGTCC AGGGCGGCTT CGGCAACTAC AGCATGACCG AACTGGAAGC GGTGCTGAAC CTGCCGATCT CGGACAAGGT CAAGTTGCGT CTCGTCGGCG CCTCGCGCGA TCGCGACGGC TTTACCCACG ACGTCCAGTG GAACAAGGAC CGCGACGACA CGCACTGGCG CATGGCGCGC CTTGGCCTGC TGATTGAGCC GACCGACGGC ATCAGCAACT ATACCATGGC ATACTATGGC AAGTCGCACA GCAACGGTTC CGGCTCGATT GCGCGCAGCT TCAATACCGA CTACTTCGTC GGCCTTGCCA CGCGTCCGGT CCCCATCGGC GGCGGCATCA GTTACCCCCT CGGCGCGCTC GTGCCGACCT ACAACTTCTG CGGTGCCGGC ACTGGACCGG CCGATTGCAG CTATTACACC AACCTGATCG ACAAGCAGAA GGCACTCGGT ATCCGCCAGA CTGCGCACGG CGTTGACGAC TTCGCCAAGA TCGAATCCTG GGGTGTCAAC AACACCACCG ACATTGAGCT GACCCCCGGT CTAAAGCTGC GTAACATCGT CAGCTATGCT GAACTGAAGT CCTACTATTC CAACGACCAG GACGGCACGA TCGCGCCGAT CTACAACACC GGCACCACGG TCGAGAGCCG CACTGCCCCG CGCGACTGGT ACAAGCAGTT CACCGAGGAA CTCCAGTTCC AGGGCACCGC GCTCGAAGAC AAGCTGACCT ACACGGTTGG CGGCTTCTAC TACAAGCAGA GCCCACGCGG CACGATGGAG TCCTATTCGA TCAACGTCTG CGCCCTGCAG ACCGAGGCGG GCTGTTCGAT CGGCAAAAGT CAGATCGCCG TCACCAACGA ATCCAAGGCG CTCTATGCCC AGGCTTCGCT CGACTTCGGC GCGCTTACCC CTTCGCTCGA CAGGCTGCGC CTGACCGCGG GCTACCGCTA CACGTGGGAT ACCGTGGATG GCACGACCGC TTCGTGGAGC TACGTGAAGC TGCCCAACGG TACGCCGCTG GCCACCAACT GCTCGTGGAA GCAGGGCTCG GTCACCAATC CGCTGGTGGA CTGCGCCTTC GGTGCGAAGC TCAAGAGTTC GTCGCCGAAC TGGACGTTTG GCCTCGACTA CCGCCCCAAC CGCAACATCA TGGTCTACGC CAAGGTGACG CGCGGCTACA AGGCGGGCGG CTTCAACAGC TACGCGGTCT ATGACAACAC CCGCACCTTC GGGCCGGAAA CGGTCACCGA CTACGAGGCT GGCTTCAAGT CGGACTTCAA CGTCGGCGGG ATGACCGGGC GCCTCAACGT CAACGGCTTC TGGTTGGACT ACAAGAACAT CCAGCGCGCG GCGGGCGACT ACAACCGGAC GACCAACGGC AACGGCGCGA TCACGCTGAA CAACGCGTCG GCGGAGATCA AGGGCATCGA GGTCGAGGCG ATGATCCGTC CGGTCGAACA GGTCGAACTG GGCGGCAACT ACAGCCACCT CAACGCGAAG TACAAGTCGT TCAAGTTCGA CTCGAACTCG GGCGTCTGGG ATTGCACCGC GCAGTCGATC AGCAGCCCCA AGGTCTTCGC CGGGGCAGAC ATGACCTGCC GTCCGCTGCA GTACCTCTCG CCCAACATCC TCTCGGTCTA CGGGCGCTTC AGTCTGCCTA TGCCCGAAAA CGTGGGCCAG CTCAGCCTGT TCGTCAGCTA CAACTGGACC GACAAGCAGC CGACCGCGCC GTTCTCGACC GAGACTTTCC CGGACGGCAC GGTAAACGAG CCCGGCGTTC TGCTGCCGAG CTATGGCCTG CTCAACGCCA ATCTCGACTG GAAGAACGTG ATGGGTGCCC CGGTCGACGT CAGCCTGTTC GCTACCAACA TCACGAAGAA GAACTACCTG ATCTCGAACA CCGGCGTCTT CCAGACGATC GGCGCGCAGA CCGTCATGTA TGGCGAGCCG CGCATGTTCG GCGTCCGTCT GAAGTATAGC TTCGGCGGAG AGTAA
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Protein sequence | MHKGFPVKSR AMKARSAMLL AGAALGAGIA PHAAFAADAV EQAAEGSAPS SAEIIVTANR REERAQDVPI SITAITAESI RERGLTQLQD LQASVPSLVV GPNGQASRDV MSPSIRGQSA SFQGSPAVVV YMNEVPLPSA ITLSGQGGPG SFVDLQNVQV LAGAQGTLFG RNTTGGAILL TPARPTDRLE GHVQGGFGNY SMTELEAVLN LPISDKVKLR LVGASRDRDG FTHDVQWNKD RDDTHWRMAR LGLLIEPTDG ISNYTMAYYG KSHSNGSGSI ARSFNTDYFV GLATRPVPIG GGISYPLGAL VPTYNFCGAG TGPADCSYYT NLIDKQKALG IRQTAHGVDD FAKIESWGVN NTTDIELTPG LKLRNIVSYA ELKSYYSNDQ DGTIAPIYNT GTTVESRTAP RDWYKQFTEE LQFQGTALED KLTYTVGGFY YKQSPRGTME SYSINVCALQ TEAGCSIGKS QIAVTNESKA LYAQASLDFG ALTPSLDRLR LTAGYRYTWD TVDGTTASWS YVKLPNGTPL ATNCSWKQGS VTNPLVDCAF GAKLKSSSPN WTFGLDYRPN RNIMVYAKVT RGYKAGGFNS YAVYDNTRTF GPETVTDYEA GFKSDFNVGG MTGRLNVNGF WLDYKNIQRA AGDYNRTTNG NGAITLNNAS AEIKGIEVEA MIRPVEQVEL GGNYSHLNAK YKSFKFDSNS GVWDCTAQSI SSPKVFAGAD MTCRPLQYLS PNILSVYGRF SLPMPENVGQ LSLFVSYNWT DKQPTAPFST ETFPDGTVNE PGVLLPSYGL LNANLDWKNV MGAPVDVSLF ATNITKKNYL ISNTGVFQTI GAQTVMYGEP RMFGVRLKYS FGGE
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