| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3695 |
|---|
| Symbol | |
|---|
| ID | 5077843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | - |
|---|
| Start bp | 329046 |
|---|
| End bp | 330383 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640481418 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001166080 |
|---|
| Protein GI | 146275920 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.822265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGCA AAGACATGCA TCCTTTAGTC CAGTCCGTCG TCAGCGACGA GCGCTTGCCC
GACGCAGTGG ACGTCGTCGT GGTCGGGGGC GGGATCGTTG GTACGGCATC TGCCTATTAT
CTGGCGCGGC GCGGGCTTTC GGTCGCGCTG GTCGAAAAAG GGCATATTGG CTGCGAGCAA
TCCAGCCGCA GCTGGGGTTG GTGCCGGCTG CAGAACCGCG ACCGGCGAGA GATGCCTCTC
TCGCTACTGT CAATGCGGCT GTGGGACGAG CTGGCGGGAG AGATCGGCCA GGATCTGGGA
TTCCGTCGGT GCGGGCTGGT CTATACCACG GACGACGAGA AGATGCTCGC CGGGTGGGAA
GCATGGCGTC CCGTCGCCAT GGAGTTCGGC GTAGAGACCC ACATGCTGAA TGCCGCTCAG
GCTGCGGGAC GCGTGCCCGA AACGCGCCGG AAATGGGTGG GCGGCCTTCA TTCGGTGAAC
GATGGCAAGG CCGAGCCCTC CCTTGCCGCA CCCGTTCTCG CCGAAGGCGC ACGCAAGCTC
GGTGCAACGA TTCACCAAGG CTGCGCGGCG CGCGGAGTGG ACATGACGAA CGGGCGCGTG
ACCGGGCTGC ACACGGAGCG CGGCACCATT CGCGCTGACG CGGTGCTGTG TGCTGCCGGC
GCTTGGGCAT CGGCTTTCAT GCGCCGCGAA GGAATCACCT TCCCGCAGGC AAGCGTGCGG
CAGACGGCGC TCAGGACGAA GCCGACTGTC AATGTCGGCG AGGTTGTCTA TTGCCCCGAC
CTCGCGATGA CCCGGCGACT CGACGGAAGC TATACTGTCG CGATCAGCGG CAGAGTAACG
CTCGAATTGA CGCCACAGGG CCTGCGCTTC TCGCGCGAGT TCATGCCGCA GTTCATCCAG
CGCCTGAAGG CCGTGCAGAT GGGAGTTTCG GCGTCCTTCG TGAACGGTCC GGAATCGATT
GAGGCAGTAT TCGGTAGCGA TCCTGCATTC TTCGAGAAAA CCCGTGTACT CGATCCAGCG
CCCAACGGCA GGCTGGTAAA AGCGATTCTC AGCAATCTGC GCGGTACGTT CCCGCAGCTT
GCGGGGGTCG AGATAGATTC CGCGTGGGGC GCCTATGTCG ATTGTACGCC CGATGCCGTC
CCGGTTGTTT CATCGATGAA CTCGGTCGCC GGCCTCTTTC TCGCTGCGGG CTGCTCGGGG
CACGGCTTCG GCCTCGGTCC GGGAATCGGC TATCTGGCCG CTGAGCTGGT GGCCAACGAA
GCGCCAAGCG TTGATCCGAC CCATTTCCGC CTTGAACGCC TGATCGACGG TTCGCGGATA
AAGGTCGGCT CGCTTTAA
|
|---|
| Protein sequence | MQGKDMHPLV QSVVSDERLP DAVDVVVVGG GIVGTASAYY LARRGLSVAL VEKGHIGCEQ
SSRSWGWCRL QNRDRREMPL SLLSMRLWDE LAGEIGQDLG FRRCGLVYTT DDEKMLAGWE
AWRPVAMEFG VETHMLNAAQ AAGRVPETRR KWVGGLHSVN DGKAEPSLAA PVLAEGARKL
GATIHQGCAA RGVDMTNGRV TGLHTERGTI RADAVLCAAG AWASAFMRRE GITFPQASVR
QTALRTKPTV NVGEVVYCPD LAMTRRLDGS YTVAISGRVT LELTPQGLRF SREFMPQFIQ
RLKAVQMGVS ASFVNGPESI EAVFGSDPAF FEKTRVLDPA PNGRLVKAIL SNLRGTFPQL
AGVEIDSAWG AYVDCTPDAV PVVSSMNSVA GLFLAAGCSG HGFGLGPGIG YLAAELVANE
APSVDPTHFR LERLIDGSRI KVGSL
|
|---|
| |