| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3689 |
|---|
| Symbol | |
|---|
| ID | 5077837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | - |
|---|
| Start bp | 323567 |
|---|
| End bp | 324367 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640481412 |
|---|
| Product | hydratase/decarboxylase |
|---|
| Protein accession | YP_001166074 |
|---|
| Protein GI | 146275914 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCG CTGACACCCC CGCCCGGCGT CACGGAAAGG CGCTCTACGA TGCGCTGCGC
GGCCGCCGCA CGATCCGCCC GCTGATCGAG CAGGACCCGT CGCTGACGAT CGACGATGCA
TATGCCATCA GCCTCGATTT CCTCTCGCGC CGGTTGCAGG ACGGCGAGAA GGTCGTGGGC
AAGAAGATCG GCGTGACCAG CAAGGCCGTG CAGGACATGC TCGGTGTCCA CCAGCCTGAC
TTCGGCTTCC TGACCGACTG GATGCATGTC GAAGGCGATA TCGACATAGA CGCCAAGGCC
CTGATCGCTC CGCGCGCCGA GGCTGAGATC GCCTTCATCC TCAAGAGCAG CCTCAACGGC
CCCGGCGTAA CCGCCGCCGA CGTGATGGCA GCGACCGAGA GCATCGCGCC CTGCTTCGAG
ATCGTCGACA GCCGCATCGA CGACTGGAAG ATCGCCATCG TCGACACCGT GGCCGACAAC
GCCTCGTGCG GGGTCTATGT CGTGGGCAAG GAACGGCTCG ATCCCGCCGG GCTCGACCTG
CCCAATCTCC ACGTCGCGGT GACGAAGAAC GGCGAGCCGC TTTCCGAAGG TTACGGCCAT
GCCGTCCAGG GCGATCCCGC GCAGGCCGTG GCATGGCTCG CGAACACGCT CGGTGCACAC
GGCGTGACGC TGGATGCGGG CGACGTGATA CTCTCCGGCA GCCTCGTTCC CCTCGCCCCT
GCGGCGAAGG GCGACCGTTT CGAAATGACC TTGAGCAACG CCAGCGGCCC CCTGGGCACC
TGCGTCGCCA GCTTCGTGTA A
|
|---|
| Protein sequence | MPAADTPARR HGKALYDALR GRRTIRPLIE QDPSLTIDDA YAISLDFLSR RLQDGEKVVG
KKIGVTSKAV QDMLGVHQPD FGFLTDWMHV EGDIDIDAKA LIAPRAEAEI AFILKSSLNG
PGVTAADVMA ATESIAPCFE IVDSRIDDWK IAIVDTVADN ASCGVYVVGK ERLDPAGLDL
PNLHVAVTKN GEPLSEGYGH AVQGDPAQAV AWLANTLGAH GVTLDAGDVI LSGSLVPLAP
AAKGDRFEMT LSNASGPLGT CVASFV
|
|---|
| |