| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3686 |
|---|
| Symbol | |
|---|
| ID | 5077834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | - |
|---|
| Start bp | 320040 |
|---|
| End bp | 321494 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640481409 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001166071 |
|---|
| Protein GI | 146275911 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGT ATTCGCAGTA TCGCCCCCTG CCGGTCGGCG AGGTTCCGCA TTGGGACTTC
GAGACGGACG TCGCCGTGAT CGGCTTCGGG GCGACTGGCG CCTGCGCCGC GATCGAGGCG
GCGCAAGCGG GCGCGCGCGT CATGCTGTTC GAACGCTCCT CAGGCTCCGG CGGCGCATCC
GCGCTCTCTG GCGGCGAGAT CTACGTCGGC GGAGGCACCG ATGCGCAGAA GGCGGCGGGT
TTCGACGACA CTGTCGAGGC CTTCACCAAA TACCTCAAGC TTGCTGGAGG TCCGTGCGCC
GACGAGGCGA AGTGCGAAAT CTACGGCCGC GAGGCGCTGA ACCACTACCA GTGGCTCAAG
GACCAGGGCG TGCCCTATCG AGGCAACTTC CTGCCCGGCA AGCACATCGA ACCGACTGAC
GATTCCACGC TGATCTGGTC GGGCAGCGAG GCCGCTGCAC CCTTCTGCCA CGAAGCAAAG
CCCGCCCCGC GTGGCCACGT CATCCAGCAC ATGGGCTGGG GCGGCGGTCG CCCGCTGGTT
GACATACTCG AAGCCCGCGC TCGTGCGCTC GGCACCGAAA TCCACATCGA TGCCCGCGCC
GTCGCCCTGA TCGTCGACGG CACACGGGTT TGCGGTGCAG TCGTCCGGAT CGACAACCAG
GACCGCTTCG TCCGCGCGGA CAAGGGCGTG GTTCTCGCCA CCGGCGGCTT CGTGTTCAAC
GATGCGATGC GGGCCAAGTA TTGCCCCGAC ACATTCAAGG TCAACAGCCC GATCGGCGAC
AAGGACGATG GCGTCGGCAT CGAACTTGGC GTCTCGGTCG GTGGCGACGC GATCCATATG
GACCAGTTCT TCACGACCTG CCCCTGGACC ATGCCCGAAA GCCACGCCTA CGGCGTCTTC
GTCAACGTCC ACGGCCAGCG CTTCATCAAC GAGGACTGCT ATCACGGCCG CGTCAGCCGC
TGCGCGCTCG ATCAGCCCGG CGGCAAGGTC TACCTGCTGC TCGACGTCGC CAACTTCGTC
CAGCCACTCG ACCTTGCCGG CATCACCATC GCCGGCACCG GCGAGACCTG GGAAGAAGTC
GAAGCAGAGC TGGAAATGCC CCAGGGCACG CTTTCGGCCA CGATGGCTTT CTACAACGAA
CACGCCCGTG ACGGGCGGGA CCCGTTGTTC GACAAGCAGT TGCCCATCCT CAAGCCGCTC
GACCAGTCGC CCTTCATCGC GCTCGAACTG AACTTCGAGA CCAGCTACTT CAGCTTCTTT
ACCTTAGGCG GCCTCAAGAC GACGACCGAT GGCGAAGTGC TCGACCGTTC GGGCAAGGCC
ATCGCCGGGC TCTTTGCTGC GGGCCGCTGC ACTTCGGGCC TGCCGGCATG GGGCCATGGC
TATTCCTCCG GCCTCAGCCT TGCCGACTGC ACTTTCTTCG GCCGCCGGGC TGGGCGCAAG
GCCGCCCTGG CCTGA
|
|---|
| Protein sequence | MTEYSQYRPL PVGEVPHWDF ETDVAVIGFG ATGACAAIEA AQAGARVMLF ERSSGSGGAS
ALSGGEIYVG GGTDAQKAAG FDDTVEAFTK YLKLAGGPCA DEAKCEIYGR EALNHYQWLK
DQGVPYRGNF LPGKHIEPTD DSTLIWSGSE AAAPFCHEAK PAPRGHVIQH MGWGGGRPLV
DILEARARAL GTEIHIDARA VALIVDGTRV CGAVVRIDNQ DRFVRADKGV VLATGGFVFN
DAMRAKYCPD TFKVNSPIGD KDDGVGIELG VSVGGDAIHM DQFFTTCPWT MPESHAYGVF
VNVHGQRFIN EDCYHGRVSR CALDQPGGKV YLLLDVANFV QPLDLAGITI AGTGETWEEV
EAELEMPQGT LSATMAFYNE HARDGRDPLF DKQLPILKPL DQSPFIALEL NFETSYFSFF
TLGGLKTTTD GEVLDRSGKA IAGLFAAGRC TSGLPAWGHG YSSGLSLADC TFFGRRAGRK
AALA
|
|---|
| |