| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3680 |
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| Symbol | |
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| ID | 5077828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 314150 |
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| End bp | 315754 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481403 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001166065 |
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| Protein GI | 146275905 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAGGT TCGAGTTCGA TTTCGTCATC ATCGGCGGCG GCGTCGCGGG GTGCATCCTC
GCCAATCGCC TGTCCGCCGA TCCCGCCACC CGCGTCCTGC TGCTCGAGGC GGGCGGCTCC
GACAGGAGCC CGCTGATCGC CGCTCCCGGC GGGCTGCTTC CGATCATGAT GTCGGGCGCC
CACGCATGGC GCTACGTGTC CGCGCCCCAA CGCCATCTCG ACGACCGCGT GCTCTATCTC
CCGCGCGGCA AGGTGCTTGG TGGAGGCTCC TCCATCAACG GCATGACCTA TGACCGGGGC
TTCCATTCGG ACTACGATCG CTGGGCACAG GCGGGCAATC GGGGCTGGTC ATTCGAGGAT
GTCCTCCCCT ATTTCCGCAA GCTCGAGAAC TACCTGCCCA GCGAGGACGA ATGGCACGGT
AGGGGTGGCC CGATCCAGGT TACCCGCGCC GCGCAGGACC ATCCCTTTGC GAAGGCCTTC
CTCAAGGCGG GCGCCGAAGC CGGCTACCCC CTGACGCAAG ATCTCAACGG CGCCTCGCGC
GACGGCTTCG GCGCGGTGGA CCTTACCGTC GGCCGGGGTC GCCGTTCCAG CGCCTCGTCC
GCCTACCTGC GCCCTGCCAA GGGCAGGCCC AACCTCACCG TCCTGACCCA GGCGCATACC
CGCCGCATCG TGATCGAGAA CGGCCGCGCC ACCGGCGTGA TCTTCCGCCG CAAGGGCGCG
GACCGGCTGG CACTGGCCGC GCGCGAGGTG ATCCTTTCGG CAGGCGCGAT CAACAGCCCG
CAAATCCTCA TGCTCTCGGG ACTGGGCCCG GCCGCGCACC TTGCCGAACA CGGCATTCAG
GTCCTGCACG ATCTTCCCGG CGTCGGGCAG GGCCTGCAAG ACCATCTCGC CGCCCACGTA
AAGTACCGCT CGACCAAGCC CTGGTCGATG CTGCGCTATC TCAATCCCCT GCGCGGCGCG
CTCGCCATGG CCCAGTATGC CCTCCTGCGC CGAGGTCCAC TCGCCGATCC CGGCATGTCC
GTCGCCTGCA TGGTCCGCTC CGATCCCTCG CTGGATGAAC CCGACATCAA GATGCTGCTG
GTGAGCGCGC TCTTCGCGCA GAACGGGCGC GAGATGGTGC CGATGCACGG CTTCTACGCC
CATATCAACG TCGCCCGCCC GCAATCGCGG GGTTCGGTCA CGCTCGCCAG CGCCGATCCG
GAAGTGCCGC CGGTCATCGA CCAGAACTAC AACGCCGCTC AGGAAGACCG CCGCGCCATG
CGCGAAGGCG TGCGCATCGC CCGCCGCATC TTCGCCCAGC CCGCTTTCGA CATCATGCGC
GGAGAGGAAC TGGCGCCCGG CAGCGGGGTC GAATCCGATG CGCAGATCGA CGCCTATATC
CGCGCCACCG CCGAGGCCGA CTATCACTCC ACCAGCACCG CCCGCATGGG TCGCGATCCG
ATGGCCGTGG TCGATGACCG ACTGCGCGTC CACGGCGTTG CAGCCCTGCG GGTGGTCGAT
GCTTCGGTCA TGCCGCACCT TCCGGGCGGC AACACCGCCA TCCCCGTCGC GATGATCGCC
GAAAAGGCCG CCGACCTCAT TCTTTCGAAG GATTCCCGCC CATGA
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| Protein sequence | MERFEFDFVI IGGGVAGCIL ANRLSADPAT RVLLLEAGGS DRSPLIAAPG GLLPIMMSGA
HAWRYVSAPQ RHLDDRVLYL PRGKVLGGGS SINGMTYDRG FHSDYDRWAQ AGNRGWSFED
VLPYFRKLEN YLPSEDEWHG RGGPIQVTRA AQDHPFAKAF LKAGAEAGYP LTQDLNGASR
DGFGAVDLTV GRGRRSSASS AYLRPAKGRP NLTVLTQAHT RRIVIENGRA TGVIFRRKGA
DRLALAAREV ILSAGAINSP QILMLSGLGP AAHLAEHGIQ VLHDLPGVGQ GLQDHLAAHV
KYRSTKPWSM LRYLNPLRGA LAMAQYALLR RGPLADPGMS VACMVRSDPS LDEPDIKMLL
VSALFAQNGR EMVPMHGFYA HINVARPQSR GSVTLASADP EVPPVIDQNY NAAQEDRRAM
REGVRIARRI FAQPAFDIMR GEELAPGSGV ESDAQIDAYI RATAEADYHS TSTARMGRDP
MAVVDDRLRV HGVAALRVVD ASVMPHLPGG NTAIPVAMIA EKAADLILSK DSRP
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