Gene Saro_3670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3670 
Symbol 
ID5077818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp303077 
End bp304312 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content66% 
IMG OID640481393 
Productmajor facilitator transporter 
Protein accessionYP_001166055 
Protein GI146275895 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGGA AGCTCCCGCT GCGCTGGTGG ATCATCGCGC TGATCACGCT CGGCACGATC 
CTCAACTACC TTGCGCGCTC GACGCTCTCG GTGGCGGCAC CGACGCTCAA GACTGAATTT
GCCATGTCGA CCGAGCAGTA CAGCTGGGTC GTGCTGGCCT TTCAGGCGAG CTACACGGTG
ATGCAGACCG TGGCGGGCGC GGTGCTCGAT GCGCTGGGCA CGCGGGTGGG GTTCTTCGTC
TTCGCGGTGG GCTGGGCGCT GAGCAACATG GCCCACGCCT TCTCGACCGG GTGGATGAGC
CTGGCCTTCT TCCGTTCGCT GCTCGGTGCG ACCGAGGCCG CAGCCATTCC GGCCGGGACC
AAGACGGTTT CGCAATGGTT TCCACCCAAG GAGCGTCCGC TCGCCACCAG CCTGTTCCAG
ATGGGCACGA GCGTGGGCAA CATGATCGCT CCGCCGCTGG TGGCGTTCTG CATCCTTGCG
TGGAACTGGC AGGCGGCGTT TCTGGTGACT GGTGCGCTGA GCCTTGTCTG GGCCGGGCTG
TGGTGGTTCG GCTACCGCGA TCCAGCGGTG CATCCGCGCC TTTCGCAAGC CGAGCGCGAT
GCGATCGTGG CGATGAACCA GCCCGATGCG ACCAAGCCGG CGACCAAGGC GCAAGTGCTG
CGCAGCCGCT CGTTCTGGGC CATCGCCGTG CCGCGCTTTC TGGCAGAGCC GGCCTGGCAG
ACCTTCAACT TCTTCATCCC GCTCTACCTC GTGGCGGTGT GGAAGCTCGA TCTCAAATCC
ATCGCGCTGT GGGGCTGGAT GCCGTTCCTG GCCGCAGACT TCGGCAGCCT TGCCGCCGGG
CTCCTGCCGC CATGGCTGAT GAAGCGCGGC TCCTCGATGC TGTCATCGCG CAAGATCACC
ATGACGCTTG GCGCGCTGTG CATGGCGGGG CCTGCCTGCA TCGGCCTTGC GACGTCGCCG
GAGATGGCGA TTGCGCTGTT CTGCGTAGGC GGCTTTGCCC ACCAGATGCT CAACGGCGCG
CTGATCACGC TCTGCGCCGA CGTGTTCGAC AGCCGCACCG TCGGCACGGC CAGCGGCATG
GCGGGTACGT CTGCCTGGGT CGGCGGCATG CTGTTCACGC TGCTGATCGG GCAGAGCGCG
GACGTGTTCG GCTACAACCC GCTGTTCGTG GCGCTGGCGG GGCTGGACCT GCTGGCAGCA
GTGGTGCTGT GGAGCCTGTT GAGAGCGCGA TCCTAG
 
Protein sequence
MLRKLPLRWW IIALITLGTI LNYLARSTLS VAAPTLKTEF AMSTEQYSWV VLAFQASYTV 
MQTVAGAVLD ALGTRVGFFV FAVGWALSNM AHAFSTGWMS LAFFRSLLGA TEAAAIPAGT
KTVSQWFPPK ERPLATSLFQ MGTSVGNMIA PPLVAFCILA WNWQAAFLVT GALSLVWAGL
WWFGYRDPAV HPRLSQAERD AIVAMNQPDA TKPATKAQVL RSRSFWAIAV PRFLAEPAWQ
TFNFFIPLYL VAVWKLDLKS IALWGWMPFL AADFGSLAAG LLPPWLMKRG SSMLSSRKIT
MTLGALCMAG PACIGLATSP EMAIALFCVG GFAHQMLNGA LITLCADVFD SRTVGTASGM
AGTSAWVGGM LFTLLIGQSA DVFGYNPLFV ALAGLDLLAA VVLWSLLRAR S