Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3644 |
Symbol | |
ID | 5077792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | + |
Start bp | 272988 |
End bp | 273620 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640481367 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001166029 |
Protein GI | 146275869 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.106311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGCAG ATGCGAACAG CACTTCGGGC AGCGGGCGAC GGGGCCGGCC ATCGGCCGAA TCCACGCGCC TGCGCATGGC CCACCTGCTC GAGGTGGCGC GCGGCATCTT CGTGCGCCGG GGCTACCGCG CGACGACGAT GGACGAAGTC GCCGCCGCTG CCGGGGTAAC CAAGCGCACG CTTTATGCCT GGCATTCCGA CAAGGAGGCG CTGTTCCGCG CCTGCGTCAT GCTGGGCGCC GAACGATTCC CGCGCATCGA GCCACAGGCC GGCGAGGACG CGCGCGCCGC GCTCGAACGC TATGTCCTTG AACTTCATCG CGAACTCACG TGCGAGGACA GCTACGGCAT GGGCGCGTTG TTCCTGCGCG AGGCGGCGGA ATTTCCGGAA CTGGCAGGCT CGATCCAGCG CGGCCACTTC GATTTCATGG TCGAGCCGCT CGCTGCATAT TTGCGCGGGC AGGGGCTGGA GGAGGAAGCC TCGACCGAGC GGACGATGCT GTTCGTGGCC ATGGCGCTTT CCCCGCTGCA CAATGCCATG CTCGTGGGCA TGGCCCTGCC CGGCACGGCT GGCGTCGCCG CGCACGCGCG GCGTTGCGTG TCGATCTTTC TCGATGGAAG CAGGCTGCGA TGA
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Protein sequence | MKADANSTSG SGRRGRPSAE STRLRMAHLL EVARGIFVRR GYRATTMDEV AAAAGVTKRT LYAWHSDKEA LFRACVMLGA ERFPRIEPQA GEDARAALER YVLELHRELT CEDSYGMGAL FLREAAEFPE LAGSIQRGHF DFMVEPLAAY LRGQGLEEEA STERTMLFVA MALSPLHNAM LVGMALPGTA GVAAHARRCV SIFLDGSRLR
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