Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3623 |
Symbol | |
ID | 5077771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | + |
Start bp | 246154 |
End bp | 247053 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640481346 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001166008 |
Protein GI | 146275848 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCTTC GCCAGCTCCG CTATTTCAGC ACGCTTGCCG AGACGCTCAA CTTCCATCGC GCGGCGGAGC GGCTGCACAT GTCGCAGCCG CCGCTGACCG TGGCGATCCG CAAGCTGGAA GAAGACCTTG GCGTGGCCCT GTTCGAGCGC GATCCACGCG GCGTGCGGCT GACGGCTGCG GGGCGGGCCG CGCTCGATCC CGCGCGCGAG GCGCTGGCCG CAGCCGAACG GGTACGCGAG GTGGTGCGGC AGGGCGCGGC GGGCCTGCGC GGGCGCCTGT CAATCGGCTT CATCGGCTCG GCCATCGGCG AGCTGGTGCC GCGCATCGTC TCGCCGTTCC GCCAGGCCTA TCCGCAGGTC GAGCTGGTGC TGGAGGAGAT GAACAGCGTC GAGATCGTCC GCGCCATTGC GGCGCGCCGG CTCGATCTCG GGCTGGTGCG CTTGCCGGTG CTGGATTCCT CTCCGGTCGA GATCGACGTG ATCGAGCGCG ACGTTCTGGT CGCGGCGATC CCGCGCGAGG ACGCGCTGGC GCGGCGGCGC GAGGTTGCGC TGGGCGACCT TAGCGAGCGG TCGTTCATCC TCTACAGCTC GGTGAGCGTG TTGCATGCAG CGACACGCCT TGCCTGCCAG CGCGCCGGCT TCGTGCCGCG CGTGGCGCAG GAGGCTACTC AGGTCCAGAC GATCCTCAGC CTTGTCGAGG CGGGACTGGG CGTCGCGCTG ATCCCGGCCA GAAGCGCGCG CTTTGCCGGG GCGGGGGTAC GCATCGTGCC GCTGGCCGAG CCGATCCCCA TCGACATGGG CCTTGCCCGC GCGCCCGGCG CGGGGCCGGT GGCGGCGAAC TTCGTGAGGG CGGCGCTGGC CTTGCACGAT AGCAAACCGA TATCGCAACT CGGAAAATAA
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Protein sequence | MDLRQLRYFS TLAETLNFHR AAERLHMSQP PLTVAIRKLE EDLGVALFER DPRGVRLTAA GRAALDPARE ALAAAERVRE VVRQGAAGLR GRLSIGFIGS AIGELVPRIV SPFRQAYPQV ELVLEEMNSV EIVRAIAARR LDLGLVRLPV LDSSPVEIDV IERDVLVAAI PREDALARRR EVALGDLSER SFILYSSVSV LHAATRLACQ RAGFVPRVAQ EATQVQTILS LVEAGLGVAL IPARSARFAG AGVRIVPLAE PIPIDMGLAR APGAGPVAAN FVRAALALHD SKPISQLGK
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