Gene Saro_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3623 
Symbol 
ID5077771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp246154 
End bp247053 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID640481346 
ProductLysR family transcriptional regulator 
Protein accessionYP_001166008 
Protein GI146275848 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTTC GCCAGCTCCG CTATTTCAGC ACGCTTGCCG AGACGCTCAA CTTCCATCGC 
GCGGCGGAGC GGCTGCACAT GTCGCAGCCG CCGCTGACCG TGGCGATCCG CAAGCTGGAA
GAAGACCTTG GCGTGGCCCT GTTCGAGCGC GATCCACGCG GCGTGCGGCT GACGGCTGCG
GGGCGGGCCG CGCTCGATCC CGCGCGCGAG GCGCTGGCCG CAGCCGAACG GGTACGCGAG
GTGGTGCGGC AGGGCGCGGC GGGCCTGCGC GGGCGCCTGT CAATCGGCTT CATCGGCTCG
GCCATCGGCG AGCTGGTGCC GCGCATCGTC TCGCCGTTCC GCCAGGCCTA TCCGCAGGTC
GAGCTGGTGC TGGAGGAGAT GAACAGCGTC GAGATCGTCC GCGCCATTGC GGCGCGCCGG
CTCGATCTCG GGCTGGTGCG CTTGCCGGTG CTGGATTCCT CTCCGGTCGA GATCGACGTG
ATCGAGCGCG ACGTTCTGGT CGCGGCGATC CCGCGCGAGG ACGCGCTGGC GCGGCGGCGC
GAGGTTGCGC TGGGCGACCT TAGCGAGCGG TCGTTCATCC TCTACAGCTC GGTGAGCGTG
TTGCATGCAG CGACACGCCT TGCCTGCCAG CGCGCCGGCT TCGTGCCGCG CGTGGCGCAG
GAGGCTACTC AGGTCCAGAC GATCCTCAGC CTTGTCGAGG CGGGACTGGG CGTCGCGCTG
ATCCCGGCCA GAAGCGCGCG CTTTGCCGGG GCGGGGGTAC GCATCGTGCC GCTGGCCGAG
CCGATCCCCA TCGACATGGG CCTTGCCCGC GCGCCCGGCG CGGGGCCGGT GGCGGCGAAC
TTCGTGAGGG CGGCGCTGGC CTTGCACGAT AGCAAACCGA TATCGCAACT CGGAAAATAA
 
Protein sequence
MDLRQLRYFS TLAETLNFHR AAERLHMSQP PLTVAIRKLE EDLGVALFER DPRGVRLTAA 
GRAALDPARE ALAAAERVRE VVRQGAAGLR GRLSIGFIGS AIGELVPRIV SPFRQAYPQV
ELVLEEMNSV EIVRAIAARR LDLGLVRLPV LDSSPVEIDV IERDVLVAAI PREDALARRR
EVALGDLSER SFILYSSVSV LHAATRLACQ RAGFVPRVAQ EATQVQTILS LVEAGLGVAL
IPARSARFAG AGVRIVPLAE PIPIDMGLAR APGAGPVAAN FVRAALALHD SKPISQLGK