Gene Saro_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3616 
Symbol 
ID5077765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp237957 
End bp240092 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content69% 
IMG OID640481340 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001166002 
Protein GI146275842 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.667421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGTCCA ACCTCTACCC CCACCTCCTT TCGCCCGGCC GCATCGGCAC GCTCGAAGTG 
AAGAACCGCA TCGCCGTGAC CGCAATGGGC GTCAGCCTGT CCGAGGACGA CGGCACCGTG
GGCGAGCGCA TCATCGCCTA TCACGAGGAA CAGGCACGCG GCGGCGCCGG GCTGATCATC
TCGGGCGTGG CGGGCGTTGC CTGGCCGGTC GGCGCGGTGG CGATGCAGCA GACCGCGATT
TCGGACGACC GCTTCATCCC CGGCCTGCGC AAGCTGACCG ACCGCGTCCA CGCGCACGGC
GCCAAGATCG CGACGCAGCT TCACCATGGC GGCTTCGTCG CCGGATACTC GCACGCGCGC
TGGGGCCATC CGCTGTGGGG CCCGGCAGTG CCGCCGGCAG CGAAGGGCAA CTTCACCGAC
TACTTCCTGA TGGAGGAACT GGCGGGCCTT GCCGGCATGA AGATGCCCGA ACTCAAGATC
CTCGAGCAGG AAGACATCGA CGTTGCCGTG CAGCAGTTCG CGCAGGGCGC GCGCCGCGCG
AAGGAGGCCG GGTTCGACGG CATCGAGATC CACGGCGGCC ACGGCTACCT CCTGTCCTCG
TTCACCTCGC CCTATACCAA CACCCGCACC GACAAGTACG GCGGCAGCCT CGAGAACCGC
CTGCGCCTGA CGCTCGAGGT GATCGCCGCG ATCCGCGCCG AAGTGGGCCG CGACTATCCG
GTGTGGATCA AGCTCGACTC GCGCGAGGTC GGCAAGCCCG GCGGCATCAC GCTCGACATG
GCCAAGGAAG CGGCGAAGCT GGTCGAGGCC GCTGGCGTCG ACGCGATCAC CATCACGTCG
TATCACGATA CGAGCGTCGG CAAGCTCCAC TCCGAATCCA ACATTCCCCA CCTCGAAAAC
TGGAACCTTC CCGCCACGGC AGAGATCCGC AAGGTCGTGT CGATCCCGGT GATCGGGTCG
GGCCGCATCG AGGTGGACAG CGCCGAAAGC GCGATTGCCA AGGGCGAGAC CGATTTCGTC
GCGATGGGCC GCAAGCTGCT GGCCGACCCG CACCTGCCGC GCAAGCTGAC CGAAGGCGCG
ACCGAGAAGG TGCGCCCCTG CGTCTACTGC TATACCTGCG TCTCGGCGAT CTACATGGGC
CAGCCCACGC GCTGCGCGGT GAACGCCGGG CTGGGCAACG AGTTCGAGGG CGAACCGCCC
ATGGCGGGCG CCAACCCGCG CCGCGTCGCG GTGATCGGCG GCGGCCCCGG CGGCATGGAA
TCCGCCCGCC GGCTCGCCGC GCTCGGCCAC AAGGTCACGC TGATCGAGAA GTCGGACCGC
CTCGGCGGCA CCCTGCGTTT CGCCAGCCTC GCCTACGAAC CGAACGAGCG CATCCTCGAA
TGGCTGCGCC GCGAGGTGAA GGAGGCGGGC ATCGACGTGC GCCTGTCGAC TGTCGCAACG
CCCGACCTGC TCCGCTCGAT CGGCGCGGAC GCGGTCATCG TCGCCACCGG CGCGATCCGC
GACATGCCGC CGATCCCCGG CAACGACCAG GATCACGTCT ATTCCGGCGA CGACATGCGC
CGCATGATGC TGGGCGAAAG CTCGGAAGAG CTGAAGCGCA AGACGGGCCT GTTCACCCGC
ATCGCCACCA AGGTCGGCGC CGCTACCGGC GCCACCGCCA ATCTCGCGCT GGTGCGCAAG
GCAACCCATG CGTGGATGCC GCTGGCCGAC ACCGTGACCA TCGTCGGCGG CGAGCTGGTC
GGGCTTGAAC TGGCCGAATT CCTTTCCGAA CGCGGCCGCA CCGTGAACGT GGTCGAGGAA
GCCCCGCGCA TGGGCAAGGG CCTCACCCTC GTGCGCCGCA TGCGCCTCAT GGCCGAACTT
GCCGAACACG GCGTCGGCCT TCACGCCGGG GCCAGCGACA TCGTCATCGG CAAGGACAGC
GTGTCGTTCA CCGATGCCTC GGGCGCGCGC CAGACCGTGC CGGCGGGCAA CGTGGTCGTC
GCCAAGGGCG CGCACGGCGA CCTTTCGCTG GCCGAAGCCC TGCGCGCGGC GGGCTTCGAA
GTCCACGCCA TCGGCGATGC CAACGGCGTC GGCTACATCG AGGGCGCGAT GCACGGCGCG
CGCGGCGCGG TGCGCGCCGT CGCCGGCGCG GCCTGA
 
Protein sequence
MSSNLYPHLL SPGRIGTLEV KNRIAVTAMG VSLSEDDGTV GERIIAYHEE QARGGAGLII 
SGVAGVAWPV GAVAMQQTAI SDDRFIPGLR KLTDRVHAHG AKIATQLHHG GFVAGYSHAR
WGHPLWGPAV PPAAKGNFTD YFLMEELAGL AGMKMPELKI LEQEDIDVAV QQFAQGARRA
KEAGFDGIEI HGGHGYLLSS FTSPYTNTRT DKYGGSLENR LRLTLEVIAA IRAEVGRDYP
VWIKLDSREV GKPGGITLDM AKEAAKLVEA AGVDAITITS YHDTSVGKLH SESNIPHLEN
WNLPATAEIR KVVSIPVIGS GRIEVDSAES AIAKGETDFV AMGRKLLADP HLPRKLTEGA
TEKVRPCVYC YTCVSAIYMG QPTRCAVNAG LGNEFEGEPP MAGANPRRVA VIGGGPGGME
SARRLAALGH KVTLIEKSDR LGGTLRFASL AYEPNERILE WLRREVKEAG IDVRLSTVAT
PDLLRSIGAD AVIVATGAIR DMPPIPGNDQ DHVYSGDDMR RMMLGESSEE LKRKTGLFTR
IATKVGAATG ATANLALVRK ATHAWMPLAD TVTIVGGELV GLELAEFLSE RGRTVNVVEE
APRMGKGLTL VRRMRLMAEL AEHGVGLHAG ASDIVIGKDS VSFTDASGAR QTVPAGNVVV
AKGAHGDLSL AEALRAAGFE VHAIGDANGV GYIEGAMHGA RGAVRAVAGA A