| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3615 |
|---|
| Symbol | |
|---|
| ID | 5077764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | - |
|---|
| Start bp | 236938 |
|---|
| End bp | 237933 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640481339 |
|---|
| Product | alpha/beta hydrolase domain-containing protein |
|---|
| Protein accession | YP_001166001 |
|---|
| Protein GI | 146275841 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.363328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGCT ACAAGGTCGA GAACGGGGTG GTCCACCTCG GCAAGGTCAC GCTCGACGTG
CCGGACACGA TCAGCGAGGA GGCCAAGGCC TATCTCCGCT TCGACACCTC GGGCGGGCAG
GATCCGGACG CCCCGCCCGT ACCGATGTGG CAGATGCGCG ATGCGCTCGC CCCGATGTTC
GACTGGCTCG CCACTCAGGC GCTCGAGGTC TTTCCCTGCA ACGTCGAGGA AACGCGGATC
GCGGGCGTAC GGTGCCATCG CGTGACGCCC AAGGACGGCG TGCGCCATCC GGGCAAGCTG
CTGATAAACC TCCATGGCGG CGGCTTCGTC GTCGGCTCGG GCTCGCTGGT CGAGGCGATC
CCCATTGCCG CCGAGACCGG GTGCGAGGTC TGGGCGGTCG ATTACCGCCT GGCCCCCGAA
CATCCCTATC CGGCGGCGGT GGACGATGTC CTGGCCGTCT ACCGCGAGGC GCTGAAGGAT
CGCGCCGCCG ATGATGTGGT GGTCTACGGC ACTTCGGCTG GCGGCTTTCT CACCGCCATG
GCGGTCATGC GCTTTCAGAA AGAGGGCCTG CCCCTTCCCG CCGCCTGCGG CGTGTTCACT
GCCGGCGGCG ACCTGTCGCG GCTGGGCGAT ACCTACAACT ACCTCACTCT CGCCGGCTTC
CACGGCAACG TCAGCGCTCC GCTCGACAGC CCCGTTTCCG AACGCGCAGC CTTCCTGCGC
GATGCCGATC CGGCCGACCC GCTCGTCGCC CCGATCCGCG GCGACCTGTC GCGCTTCCCG
CCCACGCTGC TCGTTTCCAG CACGCGCGAC GCCGTGCTGA GCGCAACCGC ATTGTTCCAC
CGCGCGCTCC ACCGCGCCGG TCGCCTGGCC GAACTCCACG TGTTCGAAGC CCTGCCGCAC
GGCTTCTGGT TCAGCGTCTC CATCCCCGAA TCGCGCGAGG CAATCGATCT CATGGCCCGT
TTCTTCGAAC GCCACCTGCG TCTGGACCAC GCGTGA
|
|---|
| Protein sequence | MGSYKVENGV VHLGKVTLDV PDTISEEAKA YLRFDTSGGQ DPDAPPVPMW QMRDALAPMF
DWLATQALEV FPCNVEETRI AGVRCHRVTP KDGVRHPGKL LINLHGGGFV VGSGSLVEAI
PIAAETGCEV WAVDYRLAPE HPYPAAVDDV LAVYREALKD RAADDVVVYG TSAGGFLTAM
AVMRFQKEGL PLPAACGVFT AGGDLSRLGD TYNYLTLAGF HGNVSAPLDS PVSERAAFLR
DADPADPLVA PIRGDLSRFP PTLLVSSTRD AVLSATALFH RALHRAGRLA ELHVFEALPH
GFWFSVSIPE SREAIDLMAR FFERHLRLDH A
|
|---|
| |