| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3608 |
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| Symbol | |
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| ID | 5077757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 231720 |
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| End bp | 232523 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640481332 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001165994 |
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| Protein GI | 146275834 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.755357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCACG GACTTGAAGG CAAGCGCGCG GTCGTCACCG GCGGCGCGCA AGGGATCGGC
GCGGCCATCG CCCACCGCCT TGCAGCGGAA GGCGCGACGG TCGCCGTACT CGACCTCTCG
GGCGAAAAGG CCTCTGCGCT CCTGCCCGCG CCGCACATCG GCGTTGCCTG CGACGTATCC
GACAGCGCCT CGGTCGACGC CGCCTTTGCC GAAGTGGCAG CGCGGCTCGG CGGCGTGGAC
ATCCTCGTCA ACAATGCCGG GATCGGCAGC GCCCCCGGCG ACGGCATGGC CGAATACTAC
GCGGGACAGG CCGCGCAGGC GGGCGGCGAT GCCTCCGCCT ACGCCGACCA GACCATCCAT
TGCACCGACG ACGGCTGGTC GCGCGTGCTT TCGGTCACGC TCGACGGCGC ATTCCGGTGC
AGCCGCGCGG CGGTGCGGAT CATGGCAGAG CAGGGCACCG GCGGCGCAAT CGTCAACATC
GGGTCCACCG CCGCGCTCGC GGGCAATGGC CCGGTGCCCT ACGTCACCGC CAAGGCCGCC
GTGCTGGGCA TGACCCGGGC CATGGCGCGC GAGCTGGCCC CGCGCGGCAT CCGCGTCAAC
GCGGTCAACC CCGGCGCGAC CGAGACCCCG ATCTACGCCC CCCTCCCCGA CGAAGTGAAG
GCCGCCGTCG CCGCCGACAG CGTGATGAAG CGCCTGGCCC ACCCGGACGA GATCGCCGGC
GCGGTCGTGT TCCTGGCCGG CAACGACGCC AGCTTTGCGA CGGGAAGCAC GGTCAACGTC
AATGGAGGCG CGTGGTTCTC CTGA
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| Protein sequence | MSHGLEGKRA VVTGGAQGIG AAIAHRLAAE GATVAVLDLS GEKASALLPA PHIGVACDVS
DSASVDAAFA EVAARLGGVD ILVNNAGIGS APGDGMAEYY AGQAAQAGGD ASAYADQTIH
CTDDGWSRVL SVTLDGAFRC SRAAVRIMAE QGTGGAIVNI GSTAALAGNG PVPYVTAKAA
VLGMTRAMAR ELAPRGIRVN AVNPGATETP IYAPLPDEVK AAVAADSVMK RLAHPDEIAG
AVVFLAGNDA SFATGSTVNV NGGAWFS
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