Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3597 |
Symbol | |
ID | 5077746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | + |
Start bp | 220198 |
End bp | 221010 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640481321 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001165983 |
Protein GI | 146275823 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.791675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATC TCTTCAGCTT CAACCATTTC TGCCGCTCGC CCTGGTATGG CCTGAAGGTG GACCTGCCGG CGGCGGTCGA TGCCGTGGCG CGGGCAGGGT TCGACATGCT GGCGGTGGAC TGCCTTTCGC TTGGGCAGTG GAAGGGCGAG GGGGGCTCGG TCCGCGCGCT CGCCCGGCGG ATGCGCGATG CGGGGCTCGC GGCGGGGCCG CTTGCCGCCT GCGCGATGAT CGACGGGTCG GCCGGGGCCC TCGCGCAGCT CGAGGCGGCG GCGCGCGATG GCGAGGCGCT TGGCACCGCT ATTCTTCAGG TCAATGTGAC CGGGCCCGAC CGGCAGGCGC GGGCAGCGGC CGTGGCAGCG GCTTGCGAGC GGACGCCAGG CTTGCGCCTT GCGCTGGAGT TCATGCCGAT CAGCGGACTT TCGACCCTCG CCGAAACGCT CGACATCGTG GAGGCCGTGG GGCCGGCGCG GGCGGGGGCG CTGGTCGATG TGTGGCACCT CTCGCACGAT CCGGATGGCT GGAGCACGCT GGAAACCGCG CCGCCCGGCC ACATCGCCTA TGTCGAGATC GACGATGCCC TGCCGCCCGC TGGCGACGAC GTGCTGGCCG AGATGATGGA CCGGCGCACC TTCCCCGGTG AAGGCGTGCT GGACGTGGGG CGATTCGCGC GCACGTTACG CAATCGTGGC TTTTCGGGGG TGGTCAGTGT CGAAATCCTG AGTCGCGCGC ACCTTGCCGA CCCGCTCGGG GGTTTCGCGG CAAGAGCGCT TTCCACGGCG CGCGGGGCCT GGGACGGCGG CAATCCGGCC TGA
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Protein sequence | MTDLFSFNHF CRSPWYGLKV DLPAAVDAVA RAGFDMLAVD CLSLGQWKGE GGSVRALARR MRDAGLAAGP LAACAMIDGS AGALAQLEAA ARDGEALGTA ILQVNVTGPD RQARAAAVAA ACERTPGLRL ALEFMPISGL STLAETLDIV EAVGPARAGA LVDVWHLSHD PDGWSTLETA PPGHIAYVEI DDALPPAGDD VLAEMMDRRT FPGEGVLDVG RFARTLRNRG FSGVVSVEIL SRAHLADPLG GFAARALSTA RGAWDGGNPA
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