| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3581 |
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| Symbol | |
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| ID | 5077730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 199847 |
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| End bp | 201334 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640481305 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001165967 |
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| Protein GI | 146275807 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTGA AAATCAAGCG CATCGCGATC GACACTCACC CGGAGAACAC CGCGTTCCTC
CTGCGCAGGA GGAACGGCTA TTCGCCCGAA CAGTTCGTCG CGCTGCGCAA GATCGAGATC
ACCGGCGGCG ATGCGTCGAT CCTCGCCACC CTGGCGCTGA TCGATGACGA GAGCCTGCTC
GAACCGCACA TGATCGGCCT TGGCGAACAG GCCTTCCGCC GCCTCGGCCT GCCCGAAGGC
GCGGAAGTAA CCTTCCGCCA GGCGCCCGTC CCGCACAGCC TCGAACACGT CCGTCGCAAG
ATCGACGGCG ACGAACTGGA AGAAACCGAG ATCGCGGAGA TCATCCGCGA CATCGCCGGA
TACCGCTATT CCCCGATGGA GATCGGGGCC TTCCTCGTCG CCTGCGCCGG GTTCATGTCC
ACGCACGAAA CGCTTGCCCT CACCCGCGCA ATGGCCGGCG TCGGCCGCCA GATGCACTGG
CCGTCCGAAA TCGTCGTCGA CAAGCACTGC ATCGGCGGCA TCCCCGGCAA CCGCACCTCG
ATGATCATCG TGCCGATCAT CGCCGCGCAC GGGCTGACCA TGCCCAAGAC CTCGTCGCGC
GCGATCACCT CGCCATCGGG CACGGCCGAC ACGATGGAAG TCCTCGCCTC GGTGGACCTG
CCAGAGGACC GGCTCGTCTC CATCGTGGCA AAGGAACACG CGGTGCTTGC CTGGGGCGGC
CGGGTGAACC TGTCGCCCGC CGACGACGTG CTGATCACCG TCGAGCGTCC GTTGCGGATC
GACACCTTCG ACCAGATGGT CGCCTCGATC CTGTCGAAGA AGCTGGCCGC CGGCTCGACC
CACCTTCTCA TCGACATTCC CGTCGGCCCC ACCGCCAAGG TCCGCACCAC GCGCGAGGCG
ATCCGCCTGC GCAAGCTGTT CGAATACGTC GGCCATCGTC TCGGCCTCGT TCTCGACATC
GTCGTCACCG ACGGCTCGCA GCCGGTGGGC CGGGGCGTGG GCCCCGTGCT CGAGGCGCGC
GACGTGATGG CCGTCCTGCG CAACGAGGAC GACGCACCCC GGGACTTGCG CGAACGCGCC
GTCATGCTCG CGGGCCGGGT GCTCGAATTC GATCCCGCGC TGGCGGGCGG CAAGGGCTAT
GCCCGCGCGA TGGAACTGCT CGGTTCCGGT GCCGCGCTGG CGGCGATGGA GCGCCTGATC
GATGCGCAGG GCCGGTGCCG CGAAGTGATC CTTCCCGGCA GCCACGTCCA CGATATCTGC
GCGCCAGCCG GCGGGACGGT CATGTCCATC GATTGCCACC TGATCGCGCG CATCGCCCGC
CTTGCCGGCG CGCCGATGGA CAAGGGCGCG GGAATCGACC TGCTGCACAA GGTGGGCGAC
CGGGTGCGCG CTGACGAAGT GCTCTATCGC ATCCACGCCC ACTCTCCGAC CGGCCTCGAA
TATGCGCGCG AACTGGCCGT GGCGAGTTCC GGTTACGTGG TCGGATGA
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| Protein sequence | MALKIKRIAI DTHPENTAFL LRRRNGYSPE QFVALRKIEI TGGDASILAT LALIDDESLL
EPHMIGLGEQ AFRRLGLPEG AEVTFRQAPV PHSLEHVRRK IDGDELEETE IAEIIRDIAG
YRYSPMEIGA FLVACAGFMS THETLALTRA MAGVGRQMHW PSEIVVDKHC IGGIPGNRTS
MIIVPIIAAH GLTMPKTSSR AITSPSGTAD TMEVLASVDL PEDRLVSIVA KEHAVLAWGG
RVNLSPADDV LITVERPLRI DTFDQMVASI LSKKLAAGST HLLIDIPVGP TAKVRTTREA
IRLRKLFEYV GHRLGLVLDI VVTDGSQPVG RGVGPVLEAR DVMAVLRNED DAPRDLRERA
VMLAGRVLEF DPALAGGKGY ARAMELLGSG AALAAMERLI DAQGRCREVI LPGSHVHDIC
APAGGTVMSI DCHLIARIAR LAGAPMDKGA GIDLLHKVGD RVRADEVLYR IHAHSPTGLE
YARELAVASS GYVVG
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