| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3562 |
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| Symbol | |
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| ID | 5077711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 179047 |
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| End bp | 181290 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640481286 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001165948 |
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| Protein GI | 146275788 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000379624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAACA CCAGAAAGAT CGCATTCGCT TGCATCGCTT CGACGATCGC GCTTGCGCAC
CCGGCCTTCG CACAGGACGC TGCCGATCAG CCCAACGACG GCGACATCAT CGTCACGGCC
AACCGCACCT CGTCGCTGCT GTCCAAGACC CCGATCGCGA TGACCGCGGT CGCCGGCGAC
GACCTGATCC AGTCGGGCAT CACCAACCCG ACCCAGCTTG AAGAGACCGT TCCGAACCTG
TCGATCGTGC GCGGCAATGG CCTGCAGATC ACGATCCGCG GCGTGACCAG CACCGACGGC
ACCGAAAAGG GCGATCCCTC GGCGGCGTTC ATGGTCAACG GCGTCTACCT TGCCCGTCCC
CAGGCGCAGG AAGTCTCGTT CTTCGACATC GAACGCATCG AAGTTCTGCG CGGTCCCCAG
GGCACACTCT ATGGCCGCAA CTCGACTGCT GGCGTCGTCA ACATCCTGAC CGTCCAGCCC
AAGTTCGAAT TCGGCGCGCG CGCCGACGTG TCCTATGGCA ACTACGACGC GCTCAATGGC
ACAGTCGCCA TCAACCTGCC GGCGAGCGAG AGCATCGCCT TCCGCGTTGC CGCCAACATC
GACCGTCGCG ACAGCTACCT GATCGACGGC AATTCTGCCG ACGGCATCGG TATCGGCCGC
TTCAAGGACA ACAAGGCGGT CCGTCTCTCG GCCCTGTTCA AGCCGACCCC CGATCTCAGC
CTGCTGCTCG TCGGCGACTA TAGCTGGCAG AAGGGCAGCC CGACCAACGG CGTCGAGACC
TCGACTTTCT TCTCCGACAT CACCAGCGGT GGCCGCCCGA CGTTCGAGCG CCCGACCTAT
CTTGACCCGT CGGCCCGCGC CGGGCGCACC CTTCTTGCCA CTCAGGCGCA GTACGCATTC
CGCGATAGCA CCGACCGTGG CGTGATGGGG CAGCTCGATT ACACCATGGG CAACGTCACG
CTGACCTATG TCGGGTCCTA TCGCGAATCC GACCGCAAGG AATTCAGCAA TGTCGGCACC
CTGCCGATCA GCGCAGACTT CTACGGCAGC TATTGGCAGA CCTCGCAGGA AGTGCGCCTT
GCCTATGGCG GCGACGGCCC GCTCCAGGCG CAGGTCGGCG GCTACTACTT CAAGGAGAAG
TCGGGCATCG CCTTCTTCAT CAACAACCTG CTGGGCGCCA ACACCCGCTT CGGCTTCCCG
CAGGACCCGA CCATTGCCGA AAACAAGTCG GTGTTCGGTC AGGCGACCTA TGAAATCGCG
CAGGACGTGA AGCTGACCGG CGGTGTCCGC TATTCGCACG ACCTCAAGTC GCGCGTGGGC
GCAACGGTGC TCGATTCCTA TTCGTCGGTC GTGGACTCCT CGAACATCGG CGAGTTCCTG
GACCGCACCA CGTTCCAGGT GAATGACGCG AAGCGCAATT TCTCCAAGGT CACCTGGCGC
GCGGGCATCG ACTACGACAG CCCGCTGGGC CTGATCTACG CCTCGGTCTC GACCGGCTAC
AAGGCAGGCG GCTTCAACGA CGGCTGCGAA GTCGGCAAGG GCGACAACTG CGCCCTCGCG
GCCGGCGACC TCTACTACCA GCCCGAGGAG CTGACCGCCT ACGAAGCCGG CTTCAAGTTC
CGCATCAGCC CCGAGTTCCG CCTGAACGCG ACCGTGTTCC ACTACGACTA CAAGGGCCTG
CAGCTTTCGC AGGTGTCCAA TGCCTGCGGC GGTCCTTGCC AGGTCACTTC GAACGCGGCC
AAGGCCAAGG TCGATGGCGT GGAGCTTGAT GCCACGATCC AGCCGGTGGA CAACTTCACC
GTTCGTCTCG CGCTCAACTA CCTCGACGCG CGCTACGGAC AGTTCACGCC CAGCTACGAG
GACGAAGATG CCGAGGGCGG CTTCAGCTAC GTCAATTTCG CGGGCCGCGC GCTCAACCGC
AGCCCCAAGT GGAGCTGGGT TGCCGGCGTG AACTACGTGG TGCCGGTGGG CGAAGGCCGG
ATCGTGCTGG ATGCGCAGAC CGCGGCGCGC AGCAAGTACG AGCTTACCGA CCTTGCCAAC
TACGCCTACT TCTACCAGCC CGGTTTCTCG AAGACCGACG CGTCGATCAC CTACAACGCT
CCGCAGGACC GTTTCTATCT CGCCGCCTTC GTCGAGAACC TCGAGAACAA TCTTGTCCTG
ACCGGCGCGA CGACCGGCAC GCTCGGTTCG GTCACGTTCT CCGACCCGCG TACCTTCGGC
GTGCGCGCGG GCGTGAAGTT CTGA
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| Protein sequence | MMNTRKIAFA CIASTIALAH PAFAQDAADQ PNDGDIIVTA NRTSSLLSKT PIAMTAVAGD
DLIQSGITNP TQLEETVPNL SIVRGNGLQI TIRGVTSTDG TEKGDPSAAF MVNGVYLARP
QAQEVSFFDI ERIEVLRGPQ GTLYGRNSTA GVVNILTVQP KFEFGARADV SYGNYDALNG
TVAINLPASE SIAFRVAANI DRRDSYLIDG NSADGIGIGR FKDNKAVRLS ALFKPTPDLS
LLLVGDYSWQ KGSPTNGVET STFFSDITSG GRPTFERPTY LDPSARAGRT LLATQAQYAF
RDSTDRGVMG QLDYTMGNVT LTYVGSYRES DRKEFSNVGT LPISADFYGS YWQTSQEVRL
AYGGDGPLQA QVGGYYFKEK SGIAFFINNL LGANTRFGFP QDPTIAENKS VFGQATYEIA
QDVKLTGGVR YSHDLKSRVG ATVLDSYSSV VDSSNIGEFL DRTTFQVNDA KRNFSKVTWR
AGIDYDSPLG LIYASVSTGY KAGGFNDGCE VGKGDNCALA AGDLYYQPEE LTAYEAGFKF
RISPEFRLNA TVFHYDYKGL QLSQVSNACG GPCQVTSNAA KAKVDGVELD ATIQPVDNFT
VRLALNYLDA RYGQFTPSYE DEDAEGGFSY VNFAGRALNR SPKWSWVAGV NYVVPVGEGR
IVLDAQTAAR SKYELTDLAN YAYFYQPGFS KTDASITYNA PQDRFYLAAF VENLENNLVL
TGATTGTLGS VTFSDPRTFG VRAGVKF
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