Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3562 |
Symbol | |
ID | 5077711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | - |
Start bp | 179047 |
End bp | 181290 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640481286 |
Product | TonB-dependent receptor, plug |
Protein accession | YP_001165948 |
Protein GI | 146275788 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000379624 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAACA CCAGAAAGAT CGCATTCGCT TGCATCGCTT CGACGATCGC GCTTGCGCAC CCGGCCTTCG CACAGGACGC TGCCGATCAG CCCAACGACG GCGACATCAT CGTCACGGCC AACCGCACCT CGTCGCTGCT GTCCAAGACC CCGATCGCGA TGACCGCGGT CGCCGGCGAC GACCTGATCC AGTCGGGCAT CACCAACCCG ACCCAGCTTG AAGAGACCGT TCCGAACCTG TCGATCGTGC GCGGCAATGG CCTGCAGATC ACGATCCGCG GCGTGACCAG CACCGACGGC ACCGAAAAGG GCGATCCCTC GGCGGCGTTC ATGGTCAACG GCGTCTACCT TGCCCGTCCC CAGGCGCAGG AAGTCTCGTT CTTCGACATC GAACGCATCG AAGTTCTGCG CGGTCCCCAG GGCACACTCT ATGGCCGCAA CTCGACTGCT GGCGTCGTCA ACATCCTGAC CGTCCAGCCC AAGTTCGAAT TCGGCGCGCG CGCCGACGTG TCCTATGGCA ACTACGACGC GCTCAATGGC ACAGTCGCCA TCAACCTGCC GGCGAGCGAG AGCATCGCCT TCCGCGTTGC CGCCAACATC GACCGTCGCG ACAGCTACCT GATCGACGGC AATTCTGCCG ACGGCATCGG TATCGGCCGC TTCAAGGACA ACAAGGCGGT CCGTCTCTCG GCCCTGTTCA AGCCGACCCC CGATCTCAGC CTGCTGCTCG TCGGCGACTA TAGCTGGCAG AAGGGCAGCC CGACCAACGG CGTCGAGACC TCGACTTTCT TCTCCGACAT CACCAGCGGT GGCCGCCCGA CGTTCGAGCG CCCGACCTAT CTTGACCCGT CGGCCCGCGC CGGGCGCACC CTTCTTGCCA CTCAGGCGCA GTACGCATTC CGCGATAGCA CCGACCGTGG CGTGATGGGG CAGCTCGATT ACACCATGGG CAACGTCACG CTGACCTATG TCGGGTCCTA TCGCGAATCC GACCGCAAGG AATTCAGCAA TGTCGGCACC CTGCCGATCA GCGCAGACTT CTACGGCAGC TATTGGCAGA CCTCGCAGGA AGTGCGCCTT GCCTATGGCG GCGACGGCCC GCTCCAGGCG CAGGTCGGCG GCTACTACTT CAAGGAGAAG TCGGGCATCG CCTTCTTCAT CAACAACCTG CTGGGCGCCA ACACCCGCTT CGGCTTCCCG CAGGACCCGA CCATTGCCGA AAACAAGTCG GTGTTCGGTC AGGCGACCTA TGAAATCGCG CAGGACGTGA AGCTGACCGG CGGTGTCCGC TATTCGCACG ACCTCAAGTC GCGCGTGGGC GCAACGGTGC TCGATTCCTA TTCGTCGGTC GTGGACTCCT CGAACATCGG CGAGTTCCTG GACCGCACCA CGTTCCAGGT GAATGACGCG AAGCGCAATT TCTCCAAGGT CACCTGGCGC GCGGGCATCG ACTACGACAG CCCGCTGGGC CTGATCTACG CCTCGGTCTC GACCGGCTAC AAGGCAGGCG GCTTCAACGA CGGCTGCGAA GTCGGCAAGG GCGACAACTG CGCCCTCGCG GCCGGCGACC TCTACTACCA GCCCGAGGAG CTGACCGCCT ACGAAGCCGG CTTCAAGTTC CGCATCAGCC CCGAGTTCCG CCTGAACGCG ACCGTGTTCC ACTACGACTA CAAGGGCCTG CAGCTTTCGC AGGTGTCCAA TGCCTGCGGC GGTCCTTGCC AGGTCACTTC GAACGCGGCC AAGGCCAAGG TCGATGGCGT GGAGCTTGAT GCCACGATCC AGCCGGTGGA CAACTTCACC GTTCGTCTCG CGCTCAACTA CCTCGACGCG CGCTACGGAC AGTTCACGCC CAGCTACGAG GACGAAGATG CCGAGGGCGG CTTCAGCTAC GTCAATTTCG CGGGCCGCGC GCTCAACCGC AGCCCCAAGT GGAGCTGGGT TGCCGGCGTG AACTACGTGG TGCCGGTGGG CGAAGGCCGG ATCGTGCTGG ATGCGCAGAC CGCGGCGCGC AGCAAGTACG AGCTTACCGA CCTTGCCAAC TACGCCTACT TCTACCAGCC CGGTTTCTCG AAGACCGACG CGTCGATCAC CTACAACGCT CCGCAGGACC GTTTCTATCT CGCCGCCTTC GTCGAGAACC TCGAGAACAA TCTTGTCCTG ACCGGCGCGA CGACCGGCAC GCTCGGTTCG GTCACGTTCT CCGACCCGCG TACCTTCGGC GTGCGCGCGG GCGTGAAGTT CTGA
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Protein sequence | MMNTRKIAFA CIASTIALAH PAFAQDAADQ PNDGDIIVTA NRTSSLLSKT PIAMTAVAGD DLIQSGITNP TQLEETVPNL SIVRGNGLQI TIRGVTSTDG TEKGDPSAAF MVNGVYLARP QAQEVSFFDI ERIEVLRGPQ GTLYGRNSTA GVVNILTVQP KFEFGARADV SYGNYDALNG TVAINLPASE SIAFRVAANI DRRDSYLIDG NSADGIGIGR FKDNKAVRLS ALFKPTPDLS LLLVGDYSWQ KGSPTNGVET STFFSDITSG GRPTFERPTY LDPSARAGRT LLATQAQYAF RDSTDRGVMG QLDYTMGNVT LTYVGSYRES DRKEFSNVGT LPISADFYGS YWQTSQEVRL AYGGDGPLQA QVGGYYFKEK SGIAFFINNL LGANTRFGFP QDPTIAENKS VFGQATYEIA QDVKLTGGVR YSHDLKSRVG ATVLDSYSSV VDSSNIGEFL DRTTFQVNDA KRNFSKVTWR AGIDYDSPLG LIYASVSTGY KAGGFNDGCE VGKGDNCALA AGDLYYQPEE LTAYEAGFKF RISPEFRLNA TVFHYDYKGL QLSQVSNACG GPCQVTSNAA KAKVDGVELD ATIQPVDNFT VRLALNYLDA RYGQFTPSYE DEDAEGGFSY VNFAGRALNR SPKWSWVAGV NYVVPVGEGR IVLDAQTAAR SKYELTDLAN YAYFYQPGFS KTDASITYNA PQDRFYLAAF VENLENNLVL TGATTGTLGS VTFSDPRTFG VRAGVKF
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