| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3560 |
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| Symbol | |
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| ID | 5077709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 176934 |
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| End bp | 178376 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481284 |
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| Product | dehydrogenase catalytic domain-containing protein |
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| Protein accession | YP_001165946 |
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| Protein GI | 146275786 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000824091 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAATA TCCGCCCGTT CTGCATGCCC AAGTGGGGCA TCGAAATGAC CGAGGGCACC
ATCGCCGAAT GGATGGTCAA GGAAGGCGAG GCCTTCAACA AGGGTCAGGT CCTCTGCCTG
ATCGAGACCG CCAAGATCAC CAACGAGGTG GAAGCGGAAT ACGACGCGGT CCTGAAGCGC
CTGCTGACGC CTGCGAGCGA CGAGGCCCAC CCCGTGGGCG CGCTGCTGGC GGTCTTTGCC
GATGCCGACA CGACCGACGC CGAGGTCGAT GAGTTCATCG CCGGCTTCAA GCCCGCCGAG
ACCTCGGTTG CGGCCAAGAG CGGCGGCGGT TCGGCCCCGG CCCCCGCCCC GGCTGCGGCG
GCGCCTGCTC CGGCGGCTCC CGCGCGCACG CCGACGAAGA TCGTCACCAA CCGCGCAATC
AGCCCCGAGG CATTGAAGCT GGCCGAGGCC GAAGGCGTCG ACATCGAACC CATCGAAGGT
TCGGGCCGCA ATGGCCGGAT CACCTACCAG GATGTGGTTC AGGCCCTGCG CCCGGAGCGC
GCCTTGTCAT ACAAGGGCAG CGCGCAGCTG GTGGAGGACA GCCCCGAGGC CTTCGCGTCG
CCGCTGGCCC GCCGCATCGC GGCCCAGCAC GGCATAGCGC TGGCCGGGAT CAAGGGCACC
GGCGCGCGCG GCCGTATCTC GAAAGCGGAC GTGATGGCGC TGGTCAAGCC GACCACGGCC
GCGGCACCGG TCTTCGGCGC GCCGTTCGAA CTGGTTGCCA ACCAGCCGCA GGTCCAGCCG
TTCGACAAGG TACGCAAGGT CGTCGCGCGC CGCCTGACCG AGGCGAAGCA GACGATCCCG
CACTTCTACC TGCGCGTCTC GGCCTCGGTC GACGCGCTGA TGGACTTGCG CAAGACGGCC
AACCTCGTGC TCGGCACCAA GGCTTCGATC AACGACTACC TGGTCAAGGC CGTGGCGCTG
GCGCTGGTGC GGCATCCCGA CGTCAACGTG CAGGTCCATG GCGACAGCGT CCACAGCTTC
CCCCACGCCG ATGTCGCCAT CGCGGTTGCC AGCCCCAAGG GCCTGGTCAC CCCGATCGTG
CGACAGGCGG ATCGCATGCA CATCGCGCAG ATCGCGGCCA CTACCCGCGC ACTGATCGAC
AAGGCACAGG CGGGCCGGCT CGGCTATGAG GACATGGACG GCGGGACCTT CTCGGTGTCG
AACCTCGGCA TGTTCGGGAT CGAGCAGTTC GATGCGATCA TCAACCCGCC GCAGGGCGCG
ATCCTTGCGG TCGGCGGGGT GAACCGCGTG GCGGTGGAAG CGGCGAACGG CGACATCGCT
TTCGAAAACC GCATCCAGCT GACCATGTCG GTCGATCATC GCGCAATCGA TGGCGCTGCG
GGCGCGAAGT TCCTGCAGAC GCTCAAGGGC CTGCTCGAAG CGCCGGAAGG ACTGTTCGCA
TGA
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| Protein sequence | MANIRPFCMP KWGIEMTEGT IAEWMVKEGE AFNKGQVLCL IETAKITNEV EAEYDAVLKR
LLTPASDEAH PVGALLAVFA DADTTDAEVD EFIAGFKPAE TSVAAKSGGG SAPAPAPAAA
APAPAAPART PTKIVTNRAI SPEALKLAEA EGVDIEPIEG SGRNGRITYQ DVVQALRPER
ALSYKGSAQL VEDSPEAFAS PLARRIAAQH GIALAGIKGT GARGRISKAD VMALVKPTTA
AAPVFGAPFE LVANQPQVQP FDKVRKVVAR RLTEAKQTIP HFYLRVSASV DALMDLRKTA
NLVLGTKASI NDYLVKAVAL ALVRHPDVNV QVHGDSVHSF PHADVAIAVA SPKGLVTPIV
RQADRMHIAQ IAATTRALID KAQAGRLGYE DMDGGTFSVS NLGMFGIEQF DAIINPPQGA
ILAVGGVNRV AVEAANGDIA FENRIQLTMS VDHRAIDGAA GAKFLQTLKG LLEAPEGLFA
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