| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3542 |
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| Symbol | |
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| ID | 5077691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 159647 |
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| End bp | 160423 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481266 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001165928 |
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| Protein GI | 146275768 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATCCGA ACCAGGTTTT CCTTGAAGGG AAAGTCGCCA TCGTCACCGG CGCAGGCGTC
GGCATGGGCG CTGCAACTGC CCGCCTGCTC GCCGCGCGGG GGGCCAGGGT CGTCGTTTCG
GACATCAACC CCGACACCGC CGCCGCGACC GTCGAGACGA TCCGCGCCGA TGGCGGCACC
GCCCACGCCG TGCGTACCGA CGTGTCGGAC GAAGCTCAGG TCGAAGCGCT GGTCGCCGAG
ACCGTCGCCA CGTTCGGCAG GCTGGACTGC GCGGTCAACA ATGCCGCGAT AACGCCCGAC
GTGCTGCCCA TCCACGAAGC GGACATGGCC GTGTTCGACA GGGTGCTGAA CGTCGACCTG
CGGTCGGTCA TGCTGTGCAT GAAGTACGAG ATTCGCCAGA TGCTGGCGCA GGAGGGACCA
GGGTCGATCG TCAACATCGG ATCGGTCAGC TCGTTCCGCC CGCAGCCGAA CAACGCGGCC
TATGTCGCGG CCAAGCACGG CGTGATCGGC CTGACCAAGA CCGGGAGCCT CGAATATGCG
GGGCGCGGCA TCCGGGTGAA CGCCGTGCTG CCCGGCGCCA TCGACACGCC GATGCTGCGC
GGGGCGCTGG AGACGACGGG CTTTACCGAA GCGGACTTCG CCCCGGCGCT GAGCCTGTTC
GGGCGCTTCG GCAAGCCGGA GGAAGTGGCC GAGGCCAGCG CCTGGCTCTG TTCCGATGCA
GCAAGCTACG TGACCGGGCA CAGCCTCGCG GTCGAAGGTG GCTACCTGAC GCGGTAG
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| Protein sequence | MNPNQVFLEG KVAIVTGAGV GMGAATARLL AARGARVVVS DINPDTAAAT VETIRADGGT
AHAVRTDVSD EAQVEALVAE TVATFGRLDC AVNNAAITPD VLPIHEADMA VFDRVLNVDL
RSVMLCMKYE IRQMLAQEGP GSIVNIGSVS SFRPQPNNAA YVAAKHGVIG LTKTGSLEYA
GRGIRVNAVL PGAIDTPMLR GALETTGFTE ADFAPALSLF GRFGKPEEVA EASAWLCSDA
ASYVTGHSLA VEGGYLTR
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