Gene Saro_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3529 
Symbol 
ID5077678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand- 
Start bp144951 
End bp145625 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID640481253 
ProductTetR family transcriptional regulator 
Protein accessionYP_001165915 
Protein GI146275755 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGTT CGACGATGCA GAAGCGCATG CTCCAGGCAA TGCGCCCCAG CGCGATGGAA 
GAAGGGGAGC CCAAGCGCTG GCAGCAGCGC AAGTCGGCGC GCACCCGCGA GAAGATGCTC 
GAGGCGGCGG TCGACTGCCT GGTCGAGGGC GGATATGCCG GACTGACGAC CGCGCAGGTG 
GCCGAGCGCG CGCAAGTTTC GCGCGGGGCC ATGCACCACC ACTTCGCGAC GCGGATGGAC 
CTGGTGGCGG CGGTGGTCGA GCACATCTTC TACCAGCGGA TGCGCGTGTT CCTCGACGAT 
TACATCGCCG CGATGGCGCA GAGCCGGGGC GCGCTGCTGA TCGACCTTGC CACCGACGCG 
CACTGGCGCA GCGTGCAGAC GCGCGAATAT GCGGCCTACC TGGAACTGGC GGTGGCGGCG 
CGGACCGACC ACGAACTCAA TGCCGCCTTC GAACCCGCCG CCCGCCGCTA TGACGAGGTG 
TGGACGGCGG AGATGATCGA ATCCTTCCCG CAGTGGCAGG ACCAGTGGCA GGCGATGAAA 
CTGGGCAGCG ATTTCGCCAT CGCGGTCCAT TCGGGCCTGC TGCTGCACCG GCCGGTGCTG 
GGGCCCGAGC GCATCGAGCA GGTGCTCAGG CTGACCATCG CGACGGTGCG CGGGCTCTAC 
GATCCGATAA CCTGA
 
Protein sequence
MAGSTMQKRM LQAMRPSAME EGEPKRWQQR KSARTREKML EAAVDCLVEG GYAGLTTAQV 
AERAQVSRGA MHHHFATRMD LVAAVVEHIF YQRMRVFLDD YIAAMAQSRG ALLIDLATDA 
HWRSVQTREY AAYLELAVAA RTDHELNAAF EPAARRYDEV WTAEMIESFP QWQDQWQAMK 
LGSDFAIAVH SGLLLHRPVL GPERIEQVLR LTIATVRGLY DPIT