| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3525 |
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| Symbol | |
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| ID | 5077674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 139955 |
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| End bp | 142255 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640481249 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001165911 |
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| Protein GI | 146275751 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATCG TCGCCGTGCT GCTCGCCAGC ACTTCGCTTG TCGCCGCCCC GGCCTTCGCC
GCCGAAGAAG CCGCACCTGC ACCGGTCGCC CCTGAAGCCA TTTCCGATGC GGCCGCCGCC
GAAATCGTCG TCATGGGCCA GGGACAGACC CGGCAGGTGC AGGAACTTTC CACGCAGGAG
CTGACCATTC TCGCCTCGGG CACCAGCCCC TTGAAGGCGA TCGAGAAGCT GCCCAGCGTC
AATTTCCAGT CCGCCGACGC CTTCGGCACC TATGAATGGT CGACCCGCGT CACCATTCGC
GGCTTCAGCC AGAACCAGCT TGGCTTCAAC ATCGACGGCA TCCCGCTGGG CGACATGTCC
TATGGCAACG CCAACGGCCT GCACATCAGC CGCGCGATCA GCCCCGAGAA CATCGGCGTC
ACCCGCGTCA GCCAGGGCTC CGGCTCGATC ACCGCGCAGT CGACCAACAA TCTCGGCGGC
ACGCTCGAGT TCTTCTCGAT CGATCCCAAG GACGCCCTCG GCGTTACCGC CAGCGCATCC
TACGGTTCGG AAAACACCTG GCGCGGCTTT GCGCGCATTG GCCTGGGCAC CACCGATGGC
GCCCGCGCCT TCGCTTCGGT CCAGTACCAG GACGGCGAAA AGTGGAAGGG CGACGGCAAG
CAGCGCACGC TGATGGTCAA CGCCAAGGGC GTGCTCCCGC TGGGCGGCGG TACCGAACTC
GACGGCTACG TCAGCTATTC CGACCGCGCC GAGCAGGACT ACCAGGATCT CAGCCTCGCG
ATGATCCAGC GTCTCGGCTA TGACTGGGAC AACTTCGGCC CCTCGCGCTA TGCCGAAGCG
GTCCGCGTGG CCGACATCGC CGCCAACCGC GGCGACACCG GCACCGCCCC GCTCAACGCC
GCGGCGGGCA CCACCTACCC CAGCCCGATC GCTTCGGCGG ACGATGCCTA TTACGATGCC
TCGGGCCTGC GCAAGGACAC CCTCGCCTCG CTCGGCCTCA CCACGCCGCT GGGCGATGCG
CTGACCTTCA AGGTCAAGGG CTACTACCAC GAGAACGACG GCCAGGGCAC GTGGGGCAGC
CCATACGTCA ACAGCCCCAC CGGCGTGCCG ATGGCGCTGC GCACCACCGA ATACGACATC
AAGCGCAAGG GCGTGTTCGC CGCGCTTTCG GGCACGTTCG GCATCAACGA ACTCACCGTC
GGCGGCTGGT ACGAGAAGAA CGACTTCATC CAGTCGCGCA AGTTCTATGC CTATGAGAGC
CGGACCAACC CCGGCCGCGA CCACCTGAAG TTTCAGCACA ACCCGTTCTA CACGCAGTGG
TCCATCGCCT TCGAGACCGA CACGCTGCAA TACTACGTCT CCGACGACGT CGACCTCGGC
GATCTCAAGG TGAACCTTGG CTGGAAGGGC TATTCGGTCG ACACCAACGC GTTCGCGCTG
GTCAACGTCA GCGGCCTCGC CACCGGCGAC ATCAAGGTCG AGGACTGGTT CCAGCCGCAC
GTCGGCCTGA ACTACAAGCT TGGTGACGGG CTCGAGGCTT TCGCGGGCTT CACCCAGGTG
ACGCGCGCCT ACCAGGCATC GGCCACCAGC GGCCCGTTCT CGACCACGCA GGCCGGCTTC
AATGCGATCA AGGACAAACT CAAGCCCGAA AGCTCGGACA CCTGGGAGGC GGGCCTGCGC
TACAACACCG GCGTCATCAA CGCCTCGCTC GCAGGCTACT ACGTCAACTT CCGCGACAGG
CTGCTGGTGA TCCCGACTTC GGTCGGCGTC GTCGGCTCGG CCAACGTGCT GCAGAACGTC
GGCTCGGTCC GCGCACTCGG CATCGAGGCG GCGGTGGACG TGAAGCTCCC CGGCGGCTTC
GGCGCGTTCG CTTCGTACAG CTACAACGAC ACGACCTACC GCGATGACGT GACCATCACC
GCGGGCGGCA CCACGGTGGT CCGCGCGACC GCTGGCAAGA CCGTCGTCGA CACGCCAAAG
CATCTCCTGC GCGGCGAACT GTCGTATGAC AGCCAGACCG TGTTCGGCCG CGTCGGGGTC
AACTACATGT CCAAGCGCTA CTTCACCTAC CTCAACGACC AGTCGGTCCC CGGCCGCGCG
CTGGTGGACG CGACCATCGG CTACCGCCTC GACATCGGCC AGCGCCAGCC GGTCGAACTG
CAGCTCAATG CCGTGAACCT GTTCGACAAG CGCTACGTCG CCACGATCGG GTCCAACGGC
TTCGGCTTCA GCGGCGACAA CCAGACCCTG CTCGCGGGCG CACCGCGCCA GGTCTTCGTC
ACGCTCAAGG CGGGGTTCTG A
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| Protein sequence | MRIVAVLLAS TSLVAAPAFA AEEAAPAPVA PEAISDAAAA EIVVMGQGQT RQVQELSTQE
LTILASGTSP LKAIEKLPSV NFQSADAFGT YEWSTRVTIR GFSQNQLGFN IDGIPLGDMS
YGNANGLHIS RAISPENIGV TRVSQGSGSI TAQSTNNLGG TLEFFSIDPK DALGVTASAS
YGSENTWRGF ARIGLGTTDG ARAFASVQYQ DGEKWKGDGK QRTLMVNAKG VLPLGGGTEL
DGYVSYSDRA EQDYQDLSLA MIQRLGYDWD NFGPSRYAEA VRVADIAANR GDTGTAPLNA
AAGTTYPSPI ASADDAYYDA SGLRKDTLAS LGLTTPLGDA LTFKVKGYYH ENDGQGTWGS
PYVNSPTGVP MALRTTEYDI KRKGVFAALS GTFGINELTV GGWYEKNDFI QSRKFYAYES
RTNPGRDHLK FQHNPFYTQW SIAFETDTLQ YYVSDDVDLG DLKVNLGWKG YSVDTNAFAL
VNVSGLATGD IKVEDWFQPH VGLNYKLGDG LEAFAGFTQV TRAYQASATS GPFSTTQAGF
NAIKDKLKPE SSDTWEAGLR YNTGVINASL AGYYVNFRDR LLVIPTSVGV VGSANVLQNV
GSVRALGIEA AVDVKLPGGF GAFASYSYND TTYRDDVTIT AGGTTVVRAT AGKTVVDTPK
HLLRGELSYD SQTVFGRVGV NYMSKRYFTY LNDQSVPGRA LVDATIGYRL DIGQRQPVEL
QLNAVNLFDK RYVATIGSNG FGFSGDNQTL LAGAPRQVFV TLKAGF
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