Gene Saro_3524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3524 
Symbol 
ID5077673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp138446 
End bp139828 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content69% 
IMG OID640481248 
Productmannitol dehydrogenase domain-containing protein 
Protein accessionYP_001165910 
Protein GI146275750 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCAAG CCGCGAGACT TTCGCCCGAA GCCCTGGCGA GCCTTCCTCC CGCCGTCGCG 
CGACCGCTCT ACGACAGGGA CGCGCAGGCC GTGGGCATCG TCCACTTCGG CATCGGCGCG
TTCCACCGCG CGCACCAGGC CTGGTACACC GACGCCGCCA TGAACCTGGG GGACCGCGAC
TGGGCGATCA CCGGCGTCTC GCTGCGCTCG CCCGGCGTGG CGCGGCAGAT GAACCCGCAG
CATGGGCTCT ATGCCCTGGC CGAGCGTTCG GGCGAGGGCA CGCGCCTTCG CGTCGTGGGA
TCGGTGCGCA ATGTCCTCGT CGCCAGCGAG GAGCCGGAAA GCGTGATCGC CGCGGTTGCC
TCGCCCACGA CCCGCGTGGT CAGCCTGACC GTGACCGAGA AGGGCTATTG CCGCGGCGAG
ACCGGGGATC TCGACTTCGA ACTCGCCCAT TCGCTGAGCT TCTACTACTT CGTCGCGCAA
GGCCTGCTCG CCCGGCGCAA GGCGGGGCTG CCCGGCGTGA CCCTGCTGCC GTGCGACAAC
CTTGCCGACA ACGGCGCGAA GCTCGAGCGG CTGATGCGCC AGTACCTCGA ACGCCACGAG
CCCGATCTCG TCGCATGGTT CGAGGCGAAC TGCACCTGCC CCTCGACCAT GATCGACCGC
ATCGTCCCCG CGACAACGGA CGAGGACCGC GCGATGGTGG CGGACGCGCT GAACGGGCTG
GACGATCAGG CCTGCGTCGT GACCGAGCCG TTCAGCCAGT GGGTGATCGA GGACCGCTTC
GCCGGCCCGC GCCCCGGGTG GGAAGCGGTC GGCGCGCAGC TGGTGCACGA GGTCGGCCCC
TACGAGACCG CCAAGCTGCG CATGCTCAAC GGCGCGCATT CGCTGCTCGC CTACTGCGGC
CTCGCGGCGG GCCATGCCTG CGTCCACGAA GCGATTGCCG ATCCGGCCCT GCGCCACCTC
GCCATCCGCC TGATGCGCGA GGAAGCCGCT CCGACGATCA CGCCCGCGCC CGGCCAGGAC
CTTGCCGCCT ATGCCGACGC GCTGATCGAC CGCTTCGCCA ATCCCGCGCT CGACCACCGC
CTGATCCAGA TCGCGATGGA CGGCAGCCAG AAGATCCCCC AGCGCTGGCT CGAGACGCTC
GCCGCCAATG CACGGGCCGG TCGCCAGTGC CCCGCGATCC TCGCCGGCAT CAAGGCCTGG
CTCCACCACC TCACCGGCGC CAACGGCCCG GTAGACGACC CCCTCGCCAC ACGCCTCACC
ACCCTCGCCA CACGCCACCC AAACCCCGCC GACACCGCAA AAGCCATCTT CACCCAAAAC
GGACCTCTCG ACGGAACATG GCTACCAACA CAACATGACC TCAACACACT CAAGGAAACC
TGA
 
Protein sequence
MTQAARLSPE ALASLPPAVA RPLYDRDAQA VGIVHFGIGA FHRAHQAWYT DAAMNLGDRD 
WAITGVSLRS PGVARQMNPQ HGLYALAERS GEGTRLRVVG SVRNVLVASE EPESVIAAVA
SPTTRVVSLT VTEKGYCRGE TGDLDFELAH SLSFYYFVAQ GLLARRKAGL PGVTLLPCDN
LADNGAKLER LMRQYLERHE PDLVAWFEAN CTCPSTMIDR IVPATTDEDR AMVADALNGL
DDQACVVTEP FSQWVIEDRF AGPRPGWEAV GAQLVHEVGP YETAKLRMLN GAHSLLAYCG
LAAGHACVHE AIADPALRHL AIRLMREEAA PTITPAPGQD LAAYADALID RFANPALDHR
LIQIAMDGSQ KIPQRWLETL AANARAGRQC PAILAGIKAW LHHLTGANGP VDDPLATRLT
TLATRHPNPA DTAKAIFTQN GPLDGTWLPT QHDLNTLKET