| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3518 |
|---|
| Symbol | |
|---|
| ID | 5077667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | - |
|---|
| Start bp | 129469 |
|---|
| End bp | 129891 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640481242 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_001165904 |
|---|
| Protein GI | 146275744 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA TGCTCGCGCT GTTCATGGCC GCCGCTCCGC CGATGGCCGT GATCGACGAG
GCCGATACCG TGCGGCGCGA GCCTCCGCCG CACGGGGCCA TCGGCATGAG CACGGCCTGG
CGCATCAGCG ACTTTGCGCC GCAGCCTCGC CGCATGGAGT TCCGCCGCCG CACGCTCGAT
CCCGGGGCGG CCATCGGCGA ACATCCGATC GCGCACGATG AGGTCTATTA CGTGCTCGAA
GGCGAGGGCG AGGTCGTGTC CGACGGCCAG CGCGCCACGC TGAAGCCCGG GATGACCGCC
TATCTCTATG AAGGGGCGAT AGTCGGGATC CGGCAGAAGG GCGACAGGCC GCTCGCGCTC
ATCATCGCCT ATCCGGTGAA GGAAGCGCCG GTCAGCTCCC TGGCTGGACG TAAGGGCCAG
TAG
|
|---|
| Protein sequence | MTAMLALFMA AAPPMAVIDE ADTVRREPPP HGAIGMSTAW RISDFAPQPR RMEFRRRTLD
PGAAIGEHPI AHDEVYYVLE GEGEVVSDGQ RATLKPGMTA YLYEGAIVGI RQKGDRPLAL
IIAYPVKEAP VSSLAGRKGQ
|
|---|
| |