| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3515 |
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| Symbol | |
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| ID | 5077664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 126195 |
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| End bp | 126962 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481239 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_001165901 |
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| Protein GI | 146275741 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTT TCGACCTTTC GGGCCGCGTC GCGGTCGTTA CCGGCGCGAA CACCGGGATC
GGACAGGGCA TCGCGGTGGC GCTGGCCGAG GCGGGCGCCG ACATCGCCGC CGTGGGTCGC
ACCCCGGCCG AAGAAACCGC CGCCAAGGTG CGTGCGCTCG GCCGCAAGTG CGAACTGGTG
AGCGCCGACC TTTCGACCAT CGCCCCGGTA CAGGACGTGG TCGACGAGGT GCTGTCGTCG
CTGGGCGGGC TCGACATCCT CGTCAACAAT GCCGGGATCA TCCGCCGGGC GGACGCGGTC
GACTTCACCG AAGAGGACTG GGACGCGGTC GTCGACACCA ACCTCAAATC GGTGTTCTTC
CTCTCGCAGG CTGCGGGGCG CCACATGATC GCGAACCGCG AAGCCACCGG GCGGCGCGGC
AAGATCATCA ACATTGCATC GATGCTGAGC TTCCAGGGCG GCATCCGCGT ACCCAGCTAT
ACCGCTAGCA AGAGCGGCGT TGCCGGGCTG ACCAGGCTGC TCGCCTGCGA ATGGGCCGCC
AGGGGCGTGA ACGTCAACGC CATCGCGCCG GGCTACATCG CCACGAACAA CACGTCCGCC
CTCCAGGCCG ACGAGACCCG CAACCGCCAG ATCATGGAAC GCATTCCCGA AGGCCGCTGG
GGCGATCCCG CCGACATCGG CGGTGCGGCG GTGTTCCTTG CCAGCGGCGC CGCCGACTAT
GTCCAGGGTC ACGTCCTGGC CGTGGACGGC GGGTGGCTGG CGCGATGA
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| Protein sequence | MSIFDLSGRV AVVTGANTGI GQGIAVALAE AGADIAAVGR TPAEETAAKV RALGRKCELV
SADLSTIAPV QDVVDEVLSS LGGLDILVNN AGIIRRADAV DFTEEDWDAV VDTNLKSVFF
LSQAAGRHMI ANREATGRRG KIINIASMLS FQGGIRVPSY TASKSGVAGL TRLLACEWAA
RGVNVNAIAP GYIATNNTSA LQADETRNRQ IMERIPEGRW GDPADIGGAA VFLASGAADY
VQGHVLAVDG GWLAR
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