| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3499 |
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| Symbol | |
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| ID | 5077648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 105883 |
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| End bp | 106860 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640481223 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001165885 |
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| Protein GI | 146275725 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC AGACCCGCAT TTCCCCGCCC GTGCGCAAGG CGCTGCGCCT TGCCGTGACC
GCTGCTTTCG TCGTCGGAGC CATCCTCGCC GTTCGCGCGC TTGTCGGCTA TTACCAGGCC
GATCCCTGGA CCCGCGACGG CAGGGTGCGG GCCGACATCG TGCAGGTGTC GCCCGATGTC
GGGGGGATCG TGGTCGCGGT TCGCGTCACG CATGACCAGC AGGTGCACAA GGGCGACGTT
CTGTTCGAGA TCGACCCTTC GCGCTTCGAC CTGGCGGTGG CGCGCGCGCA GGCCCAGTTG
CGGCAGGCGC AGGCCGAAGT TGCGCAGGCG CGGGCGGCCA TCGGCCATGC CGGCGTGACG
CTGACCGAGG CTCGGCGCGA GGCGGCGCGC AACCGGGGCC TGGGCGATCT TGTCGCGGGC
GAGCTGACCG AGCAGAGCGA GACCCGCGTG GGCGAGGGCC AGGCGAAGAT GGCCGAGGCG
GGCGCCGCTC TCGCGGCTGC GGAAGCAAGG GTCGAGGCCG CGCGCAATGC GCTGAACCTT
GCCAGACTGG ATCGCGCGCG GACGAAGGTC GTTGCCCCGG TCGATGGCGA GATGTCGGAC
GTGGTGCTGC GTCCCGGCGA CTACGTGAGC GCGGGTGCCC CGGTCCTTGC CCTGATCGAC
AGCGCGAGCC TTCGGGTCGA AGGCTACTTC GAGGAAACCA AGTTGCCGCG CATCCATGCC
GGGCAGCGCG CGACGATCCA CCTGATGGGC GAAGATACTG TCCTTACTGG CCGGGTGGTT
TCCATCGCGG GGGCGATCGC GGATCAGGAT CGCGGCAAGG AGCCGCGCCT CGTGCCCGCG
ATCAACCCGA CGTTCAGTTG GGTCCGTCTG CCCCAGCGCG TACCCGTTCG TGTCCGGCTG
GACCGGCCGC CGGCGGGCAT TGCGCTGATT GCCGGGCGCA CCGCCTCGGT CTCGCTCGAC
CAGGAACACA CGTCGTGA
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| Protein sequence | MTDQTRISPP VRKALRLAVT AAFVVGAILA VRALVGYYQA DPWTRDGRVR ADIVQVSPDV
GGIVVAVRVT HDQQVHKGDV LFEIDPSRFD LAVARAQAQL RQAQAEVAQA RAAIGHAGVT
LTEARREAAR NRGLGDLVAG ELTEQSETRV GEGQAKMAEA GAALAAAEAR VEAARNALNL
ARLDRARTKV VAPVDGEMSD VVLRPGDYVS AGAPVLALID SASLRVEGYF EETKLPRIHA
GQRATIHLMG EDTVLTGRVV SIAGAIADQD RGKEPRLVPA INPTFSWVRL PQRVPVRVRL
DRPPAGIALI AGRTASVSLD QEHTS
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