| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3498 |
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| Symbol | |
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| ID | 5077647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 104486 |
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| End bp | 105886 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640481222 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001165884 |
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| Protein GI | 146275724 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.916304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCGCG GGCTGCTCTC GCTTGGCATG GTGGCTTCGC TGGGGGCGTG TACCGTCGGG
CCGGACTACC ACTTGCCAGA GACCGCAGCG ATCCGGACGC CGTCGGCGAG CGCGCCCCTG
CCGGCGGACG GGAACGTCGC GACGGCTGCC GATCTCCCGC CGCGCTGGTG GCATCTCTAT
GACGATCCCG TCCTCGATCG GCTTGAGCAA GAGGCGCTGG ACGGCAGCAC CGACCTGCGC
GAGGCGGCGG CGAACCTTCA GCGGGCAAGG GCTGTGACGG CGGCGGCGGA AGGGGCTTCG
GAGCCTGATT TCGAGGTCGA GGGCGCGGCG GAACGGGCAC GGCTTTCGGG CGAGACGTTC
CTGCTGGACG AAGCGCTGCC TGTGGCAACG CTGGGCGATG CGGGCCTTTC GATGCGCTAT
CAGTTCGACC TGTTTGGCCG GGTCCGCCGC TCGGTCGAGG CCGCGAAGGC CGGGGAAGAG
GCGCGTCAGG CGCTGCTGGA AGCCGTCAAG GTCACTCTCG CGGGGGAAGT CGCGCGAGCC
TATGTTGGCG TGTGCAGCGC GCACGAAGGG CTCGAACTGG CCGAGCGCGC TGTCAGCGTG
CAGGAGGCGC AGGCGGATGC CGTGCGGCGG ATGCACGCGG CAGGGCGGCT TGGCGCGACC
GAGGTGACGG CCATCGAATC CCGCCTCGCT GCGGCGCGCG CGCGTCTTCC GGAGGAACGC
ACGCGGATCA GGGCTTCGCT CTACCGCCTG GCCTTCCTGC TCGGCCGGGC GCCTGCGGAC
TATCCGCGCG AGGCCGAGGG ATGCACGCAT CTTCCCCGCC TTGCCCGCCC GCTACCGGCG
GGCGATGGCG CGTCACTGCT GGCGCGACGG CCCGACATCC GGGCGGCGGA GCGGGAACTG
GCGGCGGCGA CGGCACGCAT CGGGGTTGCG ACGGCGGACC TGTATCCGCA GATCGGCTTT
GGCCTGTCCG CCGGGTCCAG CGGGTTCCTC TCGGATCTGG GAGAGGCGCC TGCCAATCGC
TGGAGCATCG GCTCGTTGAT CCACTGGAGC TTCCCCGGCG CGGGGGCGAG GGCGCGGGTC
CGGGCGGCCA ATGCGGATGC CGACGCGGCG CTTGCCCGGT TCGACGGGGT GGTCCTTTCA
TCGCTGCGCG AGGCGCACAC CGCGCTCGAC GCCTATGCGG GGGCGCACGA CCGTTCGGTC
GAGCTGGACC TTGCCGCAGG GGCGGCGCAG CGCGGAGCCG AGCAGGTGGC GCGCCTGCGC
CAGGCGGGAC GCGCGGCCGC CTTGCCCGAC CTTGACAGCC AAACCACCGC GCTGGCCGCG
CAGGCGCGTG CCCATGCAGG GCGCGAGGCC GTGGTCGAGA GCCAGATCAC GCTGTTCATG
GCGCTTGGCG GCGGATGGTA G
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| Protein sequence | MRRGLLSLGM VASLGACTVG PDYHLPETAA IRTPSASAPL PADGNVATAA DLPPRWWHLY
DDPVLDRLEQ EALDGSTDLR EAAANLQRAR AVTAAAEGAS EPDFEVEGAA ERARLSGETF
LLDEALPVAT LGDAGLSMRY QFDLFGRVRR SVEAAKAGEE ARQALLEAVK VTLAGEVARA
YVGVCSAHEG LELAERAVSV QEAQADAVRR MHAAGRLGAT EVTAIESRLA AARARLPEER
TRIRASLYRL AFLLGRAPAD YPREAEGCTH LPRLARPLPA GDGASLLARR PDIRAAEREL
AAATARIGVA TADLYPQIGF GLSAGSSGFL SDLGEAPANR WSIGSLIHWS FPGAGARARV
RAANADADAA LARFDGVVLS SLREAHTALD AYAGAHDRSV ELDLAAGAAQ RGAEQVARLR
QAGRAAALPD LDSQTTALAA QARAHAGREA VVESQITLFM ALGGGW
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