| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3487 |
|---|
| Symbol | |
|---|
| ID | 5077636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009427 |
|---|
| Strand | + |
|---|
| Start bp | 89664 |
|---|
| End bp | 90482 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640481211 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001165873 |
|---|
| Protein GI | 146275713 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGTA ATTCTGGACG ACTTGAAGGC AAGAAGGCAA TCGTGCTGGG CGCCAGCAGC
GAAGGCAACA TGGGTCAGGT CATCGCACAG CGCCTGATCG ACGAAGGCGC GGAAGTGCTC
GTGGCAGGGC GCAAGGATGC CGTGCTCAAG GCCTTTGCCG ACAAGACCGG TTGCCACTGG
ACCTCGTGCG ACATCACCGA CGAGGCAAGC GTCAATGCCC TGGCCGACAC GGCAGTGGCC
ACGATGGGCG GCATCGACAT CGCGATCAAC TCGACCGGCT GGGGCCTGCT CAAGCCCTTC
CTCGACGTGA CGCGCGAGGA TCTGGACGCC ATGACCGCGC TGCAACTCGT CGGCCCGCAC
CAGTTCTTCC AGGCAATGGT GCGCAAGATG GCGCGATCGC TGGGCGGGCG CGGCGGATCG
ATCATCACGA TCAGTTCGGC CACGGCCACG ATCATGCTCA ACGACCACGC GATCTACATG
GGAACCAAGG CCGGTACCGA CCACATCGTG CGCTGCATCG CGCACGAGTT CGGTCACGAG
GGCATCCGCG CCAACTCGAT CTCGCCGGGT CTCACCGATA CACCGATGAA CGAGGACGCG
AAGCAGGTTC CGGGGCTGTT CGAAAGCTTC CGCAATTCCT ATCCCCTCGG CCGCTGGGGC
ACGTCGGAAG ACGTCGCCGC CGCCGCCGTG TTCCTGGCAA GCGACGAGTG CTTCATGACC
GGAGAGAACC TGCAGGTGAA CGGCGGCCTG ACCCTGCGCC GCAACCCGAC GCGCGAGGAA
ATCGCCGCAT CCGTGGCCAA AGCAACCGGA CAGGCCTGA
|
|---|
| Protein sequence | MAGNSGRLEG KKAIVLGASS EGNMGQVIAQ RLIDEGAEVL VAGRKDAVLK AFADKTGCHW
TSCDITDEAS VNALADTAVA TMGGIDIAIN STGWGLLKPF LDVTREDLDA MTALQLVGPH
QFFQAMVRKM ARSLGGRGGS IITISSATAT IMLNDHAIYM GTKAGTDHIV RCIAHEFGHE
GIRANSISPG LTDTPMNEDA KQVPGLFESF RNSYPLGRWG TSEDVAAAAV FLASDECFMT
GENLQVNGGL TLRRNPTREE IAASVAKATG QA
|
|---|
| |