| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3476 |
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| Symbol | |
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| ID | 5077625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 78137 |
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| End bp | 79759 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640481200 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001165862 |
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| Protein GI | 146275702 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGCCG ACCTCTTCAG CCAGCTCCAC TTCGACCATG CCCAAGGTCA TATCTGGCTG
GCAGGCCGGC GCATGATGAT GATCCACGCC CGCGCCTTCG GACTCCTGCG CCACGAAGTG
GTCGAGGCTC TTGGGCTCGA GAAGGCCCGT GGCCTGTTCA CGCGGCAGGG TTACAACAGC
GGGGCGATGG ACGCCGAGAT CGCGAGCAAG GTCCGCCCCG GTGCCACCAT CGACGAGATG
TTCGCGGTCG GTCCGGAGCT GCACATGCTC GAAGGCATGG TTCGGGCCGA ACCTGTCGAA
GTCACCGTCG ACACCGGAAA GGGCGCGTTC GCTGCCGAAT ATATCTGGCG CGGGTCGACC
GAGTGCGCTG CCCACGTCGA ACTGTTCGGG ACCGGCGCCT ATCCCGCGGG CTGGTCGCAG
GCGGGCTATG CCAGCGGCTA TGCCAGCGTG TTCCTGGGCC GCCCGATCCT TTTTCGCGAG
GTCGAATGCA TTGCCATGGG CCATGCCCAT TGTCGCGTCG TCGGACGTCC CGTCGACGAA
TGGCGGGGCG GCGAGGACGA CTTGCGCTTC ATGCGCGGCG AACAGCTCAA CGAGATCAGC
CGACTTGTCC CCGGAACGGC TGCCGTCGCC GGTGCCGAAG GTCGCCCCAT CGTCGGTGCT
TCCGCCGGTT TCAACGTGGC GTTCGACATG CTTGGCCATG TTGCCGATAC CGATGCGGTC
GTCCTTTTCC TTGGCGAAAG CGGAGTCGGC AAGGAAATCT TCGCGCGCAA TCTTCACGCC
ATGGGCCGCC GAGCCGAAGG ACCGTTCATC GGCGTGAACT GCGCCGCAAT CCCCGAAAGC
CTGATCGAGG CCGAACTGTT CGGCGTAGAG AAGGGCGCAT TCACCGGCGC CACCGCATCG
CGTGCCGGCC GGTTCGAACG CGCCCGGGGC GGGACCTTGT TCCTCGACGA AATCGGCACG
CTTTCCCTCG CCGCCCAGGG CAAGCTGCTG CGCGCCATCC AGGAAGGCGA GTACGAGCGC
GTCGGCGGCA CGAAAGTCCA CAAGACCGAT GTCCGTCTCG TCGCAGCCAC CAACGTGGAT
CTTCGCGCTG CGGTGGAGGC GGGCGAGTTT CGCGCCGACC TTTTCTACCG TCTCAACGTC
TTTCCGATCC GCATTCCGCC GTTGCGCGAG CGCCGCGCCG ACCTGCCCCT GCTCATGGAA
CATTTCCTCG CGCTCTACAG CAAGCGCTAC GCCAAGACGG TCACCGGCTT CGAGGAAAGT
GCCGTTGCCG CCATGCTCGG CTATGAATGG CCCGGCAATA TCCGCGAACT GGAGAACGTG
ATCGAGCGCG GCGTCATCAT GGCACGCGAC GGCGATCCGC TGCGGCTGCA TCACCTGTTC
AGCGGCGGCG AAGTGCTTGG CCCGCGCGCG TTTCGCGTGG TCGATGGCGA TGTCGTGGCG
TCCGCGTCCG GTGCCGATCC CGCCGCAGGC CTCGTCGATG CCGGCATCGA CCTGGAGACG
ACCGAGCGCC GCATGATCGC ACGCGCACTG GAAAAGGCCG GGGGCAACAA GACCCGCGCG
GCAGCGCTCC TCGGCCTTAC GCGCGCCCAG CTCCTTTATC GCCTCGGCCG CGAGGGCGCC
TGA
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| Protein sequence | MSADLFSQLH FDHAQGHIWL AGRRMMMIHA RAFGLLRHEV VEALGLEKAR GLFTRQGYNS
GAMDAEIASK VRPGATIDEM FAVGPELHML EGMVRAEPVE VTVDTGKGAF AAEYIWRGST
ECAAHVELFG TGAYPAGWSQ AGYASGYASV FLGRPILFRE VECIAMGHAH CRVVGRPVDE
WRGGEDDLRF MRGEQLNEIS RLVPGTAAVA GAEGRPIVGA SAGFNVAFDM LGHVADTDAV
VLFLGESGVG KEIFARNLHA MGRRAEGPFI GVNCAAIPES LIEAELFGVE KGAFTGATAS
RAGRFERARG GTLFLDEIGT LSLAAQGKLL RAIQEGEYER VGGTKVHKTD VRLVAATNVD
LRAAVEAGEF RADLFYRLNV FPIRIPPLRE RRADLPLLME HFLALYSKRY AKTVTGFEES
AVAAMLGYEW PGNIRELENV IERGVIMARD GDPLRLHHLF SGGEVLGPRA FRVVDGDVVA
SASGADPAAG LVDAGIDLET TERRMIARAL EKAGGNKTRA AALLGLTRAQ LLYRLGREGA
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