Gene Saro_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3449 
Symbol 
ID5077598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand+ 
Start bp51091 
End bp51720 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content66% 
IMG OID640481173 
ProductTetR family transcriptional regulator 
Protein accessionYP_001165835 
Protein GI146275675 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.772262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGT CCCCAGACAG CCCTGAATCC CCGTTCCCCT CACCCGAGCA GAAACGCACC 
GTTCGCGAGG CAAAGCGGGC GGCAGTCCTG CGTGCGGCAG TGCAGATGTT CAACGAGCGC 
GGCTTCCACC AGACCTCGCT AGACGACGTG GCGGCGCGAC TTGGGATCAG CAAACCGACG 
ATCTACCACT ACCTCGGCAA CAAGGACCAG GTTCTGCTGG AATGCGTGAC CATCGGGCTG 
GGCCAGTTGA TCGAGGCGGC CGAGGAGGCG CGGCGTAGCG AGGGGACCGG CGCGCAGCGG 
CTGGCCGCGT TCCTTTCGCG CTATGCCCGG ATCAACATGG ACGATTTCGG CCGCTGCGTG 
ATCCGCACCG GAGACGAGGC GCTGGTGCCT GAAAGCCGGG CACGGTTTCG CGAATTGAAG 
CGGAATATCG ACACGGGAAT GCGCCGCCTC ATCGCCGAGG GAATCGCGGA CGGGTCTATC 
GCGCCATGCG ACCCCAAGAT GCTGGCCTTC ACCATCGCGG GGGCGTTGAA CTGGCCCGCG 
CGCTGGCACG ATCCCGAGGG AAGCGAAAGT CCGGAGGCAA TCGCCGACCA GATGATCCGG 
CTGCTCGGCC AGGGATACCT GCCGCGCTGA
 
Protein sequence
MEQSPDSPES PFPSPEQKRT VREAKRAAVL RAAVQMFNER GFHQTSLDDV AARLGISKPT 
IYHYLGNKDQ VLLECVTIGL GQLIEAAEEA RRSEGTGAQR LAAFLSRYAR INMDDFGRCV 
IRTGDEALVP ESRARFRELK RNIDTGMRRL IAEGIADGSI APCDPKMLAF TIAGALNWPA 
RWHDPEGSES PEAIADQMIR LLGQGYLPR