| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3445 |
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| Symbol | |
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| ID | 5077594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | - |
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| Start bp | 46771 |
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| End bp | 48534 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640481169 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001165831 |
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| Protein GI | 146275671 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGC CCCAATGGCT TTCGCTGGCC ACCCTTGTCG GGATGATGGC CCTTTTCCTG
TGGGGGCGCT TCAGGTTCGA CGTGACCGCC GTCATCGCGC TGCTAGCCGC GCTCGCACTG
GGTATCGTCA AGCCGAAGGA GGCGTTTTCG GGCTTTTCCG ACGATATCGT GATCATCGTT
GCCTCGGCCC TTGTCATGTC GGCGGCCGTG CAGCGTTCCG GCCTTATCGA AAGCCTGATG
CACCGCATCT CGCAACGCAT CCGGCGCCCG TCCTCGCACT TGCTGCTTCT GACTTCTACG
GTCGGCGTTG CTTCGGGTCT GATCAAGAAC GTCGGCGCGC TTGCCATGCT GATGCCGGCT
GCGGTGCAGA TGGCGAAGCG GAACCGGATC TCGCCCTCGG CCTATCTGAT GCCGATGTCC
TTCGCCTCGC TGCTGGGCGG GCTGATGACC CTGATCGGCA CGTCGCCCAA CATCATCGTC
AGCCGCGTGC GCGAGGAGAT GACGGGCAAG CCGTTCACGA TGTTCGACTA TTTCCCGACC
GGCTTTGCCC TTCTGGTCGT GGGCCTGGTG TTCCTGCGCC TGGGTTGGCG CCTTCTGCCC
GAGCGCGTCT CCCCGCCGGG GCTTGGCGAG GCGATCAACA TTTCGGGCTA TGTGATCGAG
GCGACAGTGG GGGAGGACTC TCCTGCCATC GGCGAGACGG TGGCCGAGTT TGCGGAAAGG
CATGAACGAC AGGTCGAGGT GAACAGCCTC CTGCGCGGCG ACATGCGCGC GGCGGCCAGC
CCCTATACGC ACCTTGCCAA AGGCGACATC CTGATCCTCA GCGGCGAGCC CGATGCGCTG
GAGAAGGTGG TCGCCACGGA CAGGCTCGCG CTGGCCGGCG CCGACGCGGC AGGTGACGGC
AGCGACGACG GCATCGGCGT GATCGAAGCG GTCGTTCGCA ACGATTCCCC GCTGATCGGT
CGCACCGCCG GCCGCCTGCT TATGCGAGAG CGGCTTGGCA TCAATCTCAT CGCGGTTTCC
CGTGCAGGCG AGACGCTGGC GCGAAAGCCC GGCCAGATTG TGCTCGAGGC AGGCGACGTG
ATCGTCCTCC AGGGCCCGCT CGAAGTGCTT CCGCAACGCC TCGGGCAGCT CGGCGCGCTG
CCACTCGCGG AACGGCCGAT CATGCTCGGC TCGACGCGGC GGCGCTGGCT GTCGGTCATC
ATCCTCGCGC TGGCGATGGC CTCGGCGGCG AGCGGGCTGG TGCCGGCTGC GGTTGCATTC
TTTGCCGCCG CGAGCCTGGC CGTCATCACC GGCGCATTGC CCGTGGGCGA GGCCTACGAG
GCGATCGAGT GGCCGATCCT GATCATGTTG GCCGCGCTCA TCCCGGTCAG CGCGTCTTTG
CAGACGACCG GCGCGTCCGA CGTCATCGCC GAAGGGCTTG CGGGCCTTGC CGTGCGATTG
CCGCCGTGGG GCGCGGTCAT GCTGATCCTG GTGGCGGCCA TGGCGGTGAC GCCCTTCCTC
AACAACGCGG CGACGGTGCT GGTCATGGCG CCCATCGCGG CCGTGTTCGC GAACGAACTT
GGCTACCGGC CCGAAGCTTT CCTGATCGCT ACCGCAGTTG GCGCAGGGTG CGATTTTCTC
ACGCCCATTG GCCATCAATG CAACACGCTG GTCTTCGGAC CGGGCGGCTA TCGCTTCGGC
GATTACGCGC GGCTCGGCGC GCCCCTATCG TTCATCGTGG TCGTGCTGGG CACGCCGCTC
ATCCTGTGGT GGTGGCCGCT TTGA
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| Protein sequence | MTQPQWLSLA TLVGMMALFL WGRFRFDVTA VIALLAALAL GIVKPKEAFS GFSDDIVIIV
ASALVMSAAV QRSGLIESLM HRISQRIRRP SSHLLLLTST VGVASGLIKN VGALAMLMPA
AVQMAKRNRI SPSAYLMPMS FASLLGGLMT LIGTSPNIIV SRVREEMTGK PFTMFDYFPT
GFALLVVGLV FLRLGWRLLP ERVSPPGLGE AINISGYVIE ATVGEDSPAI GETVAEFAER
HERQVEVNSL LRGDMRAAAS PYTHLAKGDI LILSGEPDAL EKVVATDRLA LAGADAAGDG
SDDGIGVIEA VVRNDSPLIG RTAGRLLMRE RLGINLIAVS RAGETLARKP GQIVLEAGDV
IVLQGPLEVL PQRLGQLGAL PLAERPIMLG STRRRWLSVI ILALAMASAA SGLVPAAVAF
FAAASLAVIT GALPVGEAYE AIEWPILIML AALIPVSASL QTTGASDVIA EGLAGLAVRL
PPWGAVMLIL VAAMAVTPFL NNAATVLVMA PIAAVFANEL GYRPEAFLIA TAVGAGCDFL
TPIGHQCNTL VFGPGGYRFG DYARLGAPLS FIVVVLGTPL ILWWWPL
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