Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3443 |
Symbol | |
ID | 5077592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009427 |
Strand | - |
Start bp | 45115 |
End bp | 46083 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640481167 |
Product | 3-carboxymuconate cyclase-like protein |
Protein accession | YP_001165829 |
Protein GI | 146275669 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGCCCG ACATGTTCAT AGGCTCCTAC GAGCGCTCCG GCGGGCACGG GTTGTATCCG GCGTGGCTCG ACTCGCTGGG GGCGATCAGC CTTGGGCCGC CCGATACCCG GATCGGCAAT GCCAGCTTCG GATTGCTCGA CCATCGTTGC GGCACCGCGT GGTTCGTGGA GGAGCAGGAG CCGGGTGCTG TCTCGGCCTG GCAATGGGAC GACCAGGTCT GGACGCCGCT TGGTCGTATA GGCACGGGCG GGGCGTCGCC TTGCCACCTT GTCCGCAGTC CCGACGGCAC CCTGCTGGCT GTTGCCAACA ACGATGGAGG GGTAGCCGCT CTTGTCGAAC TGGATCCGGA AACCGGCGCG CTCGGTAAGC TGGCGGGCGT CTTGCGAAAT GAGGGCGGCG CCCGCTCGCA TGCCGGTTGC GTCCGATTTG CCGGAGACCG GATCTTCATT GCCGATCGCG GCCTGGACCG GGTGCTGTCG TGTGAATACG GCGCGGCGGG GTTTGGCGAA GTGCGGACGG CTTTCGCGGC GCCGCGCGGT TCGGGACCCC GCCAACTCCT TCTGCGCGAC GATCTGGCGC TGCTCGCCTG CGAATTGACC GCACGGCTGA TGCTGTTGCG CGCCACTGGC GAAGGCTTTG AATTGCTCGA CGATATCGCG ACCGACGCTG CCGCCACGCC CGGTAATCTC GCCGGCCACC TCGCGTTTCA GGGCGACAGG ATTTTCGTCA GCAATCGCGG GGCCGATACC GTCGCGTCGT TCCGCATCGA CGGCGAGCGG TTGCGGCGGG AGGATTGTTG GTCCTCGCAT GGCCGGTCGC CGCGCCACTT CGCGATGTGC GGCAGCTATC TCGTCGTCAC CAACGAGCAG GACGGCATCG TCTGCGTGCT GGATATCGCC AATGGCGGGC GCATTGCCGG GACAGCGATC GTGCCCGGCG CGGCCTTTGT GCTGGCTATG CCGCTCTGA
|
Protein sequence | MRPDMFIGSY ERSGGHGLYP AWLDSLGAIS LGPPDTRIGN ASFGLLDHRC GTAWFVEEQE PGAVSAWQWD DQVWTPLGRI GTGGASPCHL VRSPDGTLLA VANNDGGVAA LVELDPETGA LGKLAGVLRN EGGARSHAGC VRFAGDRIFI ADRGLDRVLS CEYGAAGFGE VRTAFAAPRG SGPRQLLLRD DLALLACELT ARLMLLRATG EGFELLDDIA TDAAATPGNL AGHLAFQGDR IFVSNRGADT VASFRIDGER LRREDCWSSH GRSPRHFAMC GSYLVVTNEQ DGIVCVLDIA NGGRIAGTAI VPGAAFVLAM PL
|
| |