Gene Saro_3442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3442 
Symbol 
ID5077591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp43947 
End bp45128 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content69% 
IMG OID640481166 
Productaminotransferase 
Protein accessionYP_001165828 
Protein GI146275668 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATC CGCTCCAGCG CCTCCATCCC GTCTACGCGG GAATGCCCGT CACCATCTTC 
GAACACATGT CCGGCCTCGC GCGGGAGCTG GGGGCGATCA ATCTCGGTCA GGGCTTCCCT
GACGAAGCGC CGCCTCCAGC CTTGCTCGAA GCGTTGTCGC GCGCGGCGGC AGAGCGTTCG
CATCAATATC CACCGATGGC CGGCATCCCC GAGCTGCGCC GAGCGGTGGC GGGCTTCTAT
GCATGGACGC AAGGGCTGGA AGTCGGAGCG GAAAGCGTGA TCGTCACTTC CGGCGCGACC
GAGGCGGTGG CCTGCGCCAT CCTCGCGGCG GTCGCGCCGG GTGACGAAGT TCTGCTGTTC
TCCCCTGCCT ACGATGCCTA TGCGCCGCTG ATCCGGCGCG CGGGCGGAGT GCCCGTCTTC
GTCCCGCTAA GCCCGCCCCA CTGGCGTTAC GACGAGGCCG CGATTGTCGC CGCCGTGACA
CCGCGCACCC GCGCGCTGGT GCTCAACGAT CCGCTGAACC CCACGGGCAC CGTCGCCGCC
GACACGGAGC TTGCGATGAT CGCCAGCCTT TGCGTCAGGC ACGACCTGAT CGCGATCTGC
GACGAGGTCT GGGAGAACGT CCGCTTCGAT GGTCGTCGCC ACCGCTCGCT TCTTGCCCTG
CCCGGAATGG CCCGCCGGAC CATCAAGATC GGATCGGCCG GCAAGATCTT CGGCGCGACG
GGATGGAAGG TCGGCTGGAT GGTCGCCGCG CCCGACATGG CCGCCGTTCT CGCCCGCGCC
CATCAGTTCC TGACGTTCAC CACCGCGCCG ATGCTGCAAT GGGCTGTCGC GCAGGGGCTC
GAAGACCCTG CGCTCGCCGC AGGGTGCACC GCTCGTTGGG CCGAAACGCG CGGCGTCCTG
ATCGAGGCGC TGGGCCGACG CGGGTTCACG GTGCTGGACA CCACCGCGAC ATGGTTCACC
TGCATTGATC TGGCGGCATC GGGCATTGCG CTCGACGACC GAACCTTCAG TGACCGGGCG
GTGCGCGAGG CCGGGGTCGC GTCGATCCCC CTGTCCGCGC TATGGGAAGG CGACGCCGCA
CCCGAGGGCA TCGTGCGCTT GTGCCATTGC AAGCCGGAAG CCATGCTGCT GGAGGCCATG
GACCGGCTGG TGCGCTGGCG CGACGGCCTC AGAGCGGCAT AG
 
Protein sequence
MIDPLQRLHP VYAGMPVTIF EHMSGLAREL GAINLGQGFP DEAPPPALLE ALSRAAAERS 
HQYPPMAGIP ELRRAVAGFY AWTQGLEVGA ESVIVTSGAT EAVACAILAA VAPGDEVLLF
SPAYDAYAPL IRRAGGVPVF VPLSPPHWRY DEAAIVAAVT PRTRALVLND PLNPTGTVAA
DTELAMIASL CVRHDLIAIC DEVWENVRFD GRRHRSLLAL PGMARRTIKI GSAGKIFGAT
GWKVGWMVAA PDMAAVLARA HQFLTFTTAP MLQWAVAQGL EDPALAAGCT ARWAETRGVL
IEALGRRGFT VLDTTATWFT CIDLAASGIA LDDRTFSDRA VREAGVASIP LSALWEGDAA
PEGIVRLCHC KPEAMLLEAM DRLVRWRDGL RAA