Gene Saro_3441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3441 
Symbol 
ID5077590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp43148 
End bp43807 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID640481165 
Productmaleylacetoacetate isomerase 
Protein accessionYP_001165827 
Protein GI146275667 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATG CCCCCGCTCG CGATGCCATC GTCCTCCATG GCTTCTGGCG CTCGTCCGCC 
TCGTGGCGCG TGCGCATCGC GCTGGGTCTG AAGGGCCTGA CCTGGCAGAA CGTGTTCCAC
CACTTGCGCA AGGGAGAGCA GCGCGCGCCG GAATACCTCG GGCTCAACCC GCAGGGCTTC
GTTCCCGCAC TCGAGATCGG CGGGGCGGTG CTGACGCAGA GCCTGACGAT CTGCGAATAC
CTCGACGAGG TCTTTCCCGA GCCGCCGTTG TTGCCGGATG ACGCCCTCGA ACGGGCGAGG
GTCCGCGCGT TCGCACAGGC CGTGGCTTGC GACATCCACC CGGTCCAGAA TCTCAAGGTG
CTGAAAATGC TCCGCGCGCG CGGCTTCGAC GAGGATGCGG TAAACGCCTG GGCGCGCGAA
GTGATCGAAA GCGGGCTGGA GGCTTGCGCG AGACTGGTCG AAAGCGCCGA GGGGCCCTTC
TGCTTCGGGG AGAGGCCTAC GTTGGCCGAC GTCGTGCTGG TGCCCCAGCT CGGCAATGCG
CGGCGTTTCG GGGCAAGGAT CGATTTCGGG CGCATTCCCG CGATCGAGGC TGCCTGCCAG
GAATTGCCGG CCTTTGCCGC CGCCGTACCG GCGCTCCAGC CCGACGCCGA GGCGCTCTGA
 
Protein sequence
MNDAPARDAI VLHGFWRSSA SWRVRIALGL KGLTWQNVFH HLRKGEQRAP EYLGLNPQGF 
VPALEIGGAV LTQSLTICEY LDEVFPEPPL LPDDALERAR VRAFAQAVAC DIHPVQNLKV
LKMLRARGFD EDAVNAWARE VIESGLEACA RLVESAEGPF CFGERPTLAD VVLVPQLGNA
RRFGARIDFG RIPAIEAACQ ELPAFAAAVP ALQPDAEAL